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Genetic Variations in Prostaglandin E(2) Pathway Identified as Susceptibility Biomarkers for Gastric Cancer in an Intermediate Risk European Country
The cyclooxygenase-2 (COX-2)/prostaglandin E(2) (PGE(2)) pathway exerts deleterious pleiotropic effects in inflammation-induced gastric carcinogenesis. We aimed to assess the association of genetic variants in prostaglandin-endoperoxide synthase 2 (PTGS2), ATP binding cassette subfamily C member 4 (...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7827533/ https://www.ncbi.nlm.nih.gov/pubmed/33440718 http://dx.doi.org/10.3390/ijms22020648 |
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author | Lopes, Catarina Pereira, Carina Farinha, Mónica Medeiros, Rui Dinis-Ribeiro, Mário |
author_facet | Lopes, Catarina Pereira, Carina Farinha, Mónica Medeiros, Rui Dinis-Ribeiro, Mário |
author_sort | Lopes, Catarina |
collection | PubMed |
description | The cyclooxygenase-2 (COX-2)/prostaglandin E(2) (PGE(2)) pathway exerts deleterious pleiotropic effects in inflammation-induced gastric carcinogenesis. We aimed to assess the association of genetic variants in prostaglandin-endoperoxide synthase 2 (PTGS2), ATP binding cassette subfamily C member 4 (ABCC4), hydroxyprostaglandin dehydrogenase 15-(NAD) (HPGD), and solute carrier organic anion transporter family member 2A1 (SLCO2A1) PGE(2) pathway-related genes with gastric cancer (GC) risk in a European Caucasian population. A hospital-based case-control study gathering 260 GC cases and 476 cancer-free controls was implemented. Using a tagSNP approach, 51 single nucleotide polymorphisms (SNPs) were genotyped through MassARRAY(®) iPLEX Gold Technology or allelic discrimination by real-time polymerase chain reaction (PCR). Homozygous carriers of the minor allele for both rs689466 and rs10935090 SNPs were associated with a 2.98 and 4.30-fold increased risk for GC, respectively (95% confidence interval (CI): 1.14–7.74, p = 0.027; 95% CI: 1.22–15.16, p = 0.026), with the latter also being associated with an anticipated diagnosis age. A multifactor dimensionality reduction analysis identified an overall three-factor best interactive model composed of age, rs689466, and rs1678374 that was associated with a 17.6-fold GC increased risk (95% CI: 11.67–26.48, p < 0.0001, (cross-validation) CV consistency of 8/10 and accuracy of 0.807). In this preliminary study, several tagSNPs in PGE(2) pathway-related genes were identified as risk biomarkers for GC development. This approach may help to identify higher-risk individuals and may contribute to the tailoring screening of GC in intermediate-risk European countries. |
format | Online Article Text |
id | pubmed-7827533 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-78275332021-01-25 Genetic Variations in Prostaglandin E(2) Pathway Identified as Susceptibility Biomarkers for Gastric Cancer in an Intermediate Risk European Country Lopes, Catarina Pereira, Carina Farinha, Mónica Medeiros, Rui Dinis-Ribeiro, Mário Int J Mol Sci Article The cyclooxygenase-2 (COX-2)/prostaglandin E(2) (PGE(2)) pathway exerts deleterious pleiotropic effects in inflammation-induced gastric carcinogenesis. We aimed to assess the association of genetic variants in prostaglandin-endoperoxide synthase 2 (PTGS2), ATP binding cassette subfamily C member 4 (ABCC4), hydroxyprostaglandin dehydrogenase 15-(NAD) (HPGD), and solute carrier organic anion transporter family member 2A1 (SLCO2A1) PGE(2) pathway-related genes with gastric cancer (GC) risk in a European Caucasian population. A hospital-based case-control study gathering 260 GC cases and 476 cancer-free controls was implemented. Using a tagSNP approach, 51 single nucleotide polymorphisms (SNPs) were genotyped through MassARRAY(®) iPLEX Gold Technology or allelic discrimination by real-time polymerase chain reaction (PCR). Homozygous carriers of the minor allele for both rs689466 and rs10935090 SNPs were associated with a 2.98 and 4.30-fold increased risk for GC, respectively (95% confidence interval (CI): 1.14–7.74, p = 0.027; 95% CI: 1.22–15.16, p = 0.026), with the latter also being associated with an anticipated diagnosis age. A multifactor dimensionality reduction analysis identified an overall three-factor best interactive model composed of age, rs689466, and rs1678374 that was associated with a 17.6-fold GC increased risk (95% CI: 11.67–26.48, p < 0.0001, (cross-validation) CV consistency of 8/10 and accuracy of 0.807). In this preliminary study, several tagSNPs in PGE(2) pathway-related genes were identified as risk biomarkers for GC development. This approach may help to identify higher-risk individuals and may contribute to the tailoring screening of GC in intermediate-risk European countries. MDPI 2021-01-11 /pmc/articles/PMC7827533/ /pubmed/33440718 http://dx.doi.org/10.3390/ijms22020648 Text en © 2021 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Lopes, Catarina Pereira, Carina Farinha, Mónica Medeiros, Rui Dinis-Ribeiro, Mário Genetic Variations in Prostaglandin E(2) Pathway Identified as Susceptibility Biomarkers for Gastric Cancer in an Intermediate Risk European Country |
title | Genetic Variations in Prostaglandin E(2) Pathway Identified as Susceptibility Biomarkers for Gastric Cancer in an Intermediate Risk European Country |
title_full | Genetic Variations in Prostaglandin E(2) Pathway Identified as Susceptibility Biomarkers for Gastric Cancer in an Intermediate Risk European Country |
title_fullStr | Genetic Variations in Prostaglandin E(2) Pathway Identified as Susceptibility Biomarkers for Gastric Cancer in an Intermediate Risk European Country |
title_full_unstemmed | Genetic Variations in Prostaglandin E(2) Pathway Identified as Susceptibility Biomarkers for Gastric Cancer in an Intermediate Risk European Country |
title_short | Genetic Variations in Prostaglandin E(2) Pathway Identified as Susceptibility Biomarkers for Gastric Cancer in an Intermediate Risk European Country |
title_sort | genetic variations in prostaglandin e(2) pathway identified as susceptibility biomarkers for gastric cancer in an intermediate risk european country |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7827533/ https://www.ncbi.nlm.nih.gov/pubmed/33440718 http://dx.doi.org/10.3390/ijms22020648 |
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