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Genetic Variations in Prostaglandin E(2) Pathway Identified as Susceptibility Biomarkers for Gastric Cancer in an Intermediate Risk European Country

The cyclooxygenase-2 (COX-2)/prostaglandin E(2) (PGE(2)) pathway exerts deleterious pleiotropic effects in inflammation-induced gastric carcinogenesis. We aimed to assess the association of genetic variants in prostaglandin-endoperoxide synthase 2 (PTGS2), ATP binding cassette subfamily C member 4 (...

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Autores principales: Lopes, Catarina, Pereira, Carina, Farinha, Mónica, Medeiros, Rui, Dinis-Ribeiro, Mário
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7827533/
https://www.ncbi.nlm.nih.gov/pubmed/33440718
http://dx.doi.org/10.3390/ijms22020648
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author Lopes, Catarina
Pereira, Carina
Farinha, Mónica
Medeiros, Rui
Dinis-Ribeiro, Mário
author_facet Lopes, Catarina
Pereira, Carina
Farinha, Mónica
Medeiros, Rui
Dinis-Ribeiro, Mário
author_sort Lopes, Catarina
collection PubMed
description The cyclooxygenase-2 (COX-2)/prostaglandin E(2) (PGE(2)) pathway exerts deleterious pleiotropic effects in inflammation-induced gastric carcinogenesis. We aimed to assess the association of genetic variants in prostaglandin-endoperoxide synthase 2 (PTGS2), ATP binding cassette subfamily C member 4 (ABCC4), hydroxyprostaglandin dehydrogenase 15-(NAD) (HPGD), and solute carrier organic anion transporter family member 2A1 (SLCO2A1) PGE(2) pathway-related genes with gastric cancer (GC) risk in a European Caucasian population. A hospital-based case-control study gathering 260 GC cases and 476 cancer-free controls was implemented. Using a tagSNP approach, 51 single nucleotide polymorphisms (SNPs) were genotyped through MassARRAY(®) iPLEX Gold Technology or allelic discrimination by real-time polymerase chain reaction (PCR). Homozygous carriers of the minor allele for both rs689466 and rs10935090 SNPs were associated with a 2.98 and 4.30-fold increased risk for GC, respectively (95% confidence interval (CI): 1.14–7.74, p = 0.027; 95% CI: 1.22–15.16, p = 0.026), with the latter also being associated with an anticipated diagnosis age. A multifactor dimensionality reduction analysis identified an overall three-factor best interactive model composed of age, rs689466, and rs1678374 that was associated with a 17.6-fold GC increased risk (95% CI: 11.67–26.48, p < 0.0001, (cross-validation) CV consistency of 8/10 and accuracy of 0.807). In this preliminary study, several tagSNPs in PGE(2) pathway-related genes were identified as risk biomarkers for GC development. This approach may help to identify higher-risk individuals and may contribute to the tailoring screening of GC in intermediate-risk European countries.
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spelling pubmed-78275332021-01-25 Genetic Variations in Prostaglandin E(2) Pathway Identified as Susceptibility Biomarkers for Gastric Cancer in an Intermediate Risk European Country Lopes, Catarina Pereira, Carina Farinha, Mónica Medeiros, Rui Dinis-Ribeiro, Mário Int J Mol Sci Article The cyclooxygenase-2 (COX-2)/prostaglandin E(2) (PGE(2)) pathway exerts deleterious pleiotropic effects in inflammation-induced gastric carcinogenesis. We aimed to assess the association of genetic variants in prostaglandin-endoperoxide synthase 2 (PTGS2), ATP binding cassette subfamily C member 4 (ABCC4), hydroxyprostaglandin dehydrogenase 15-(NAD) (HPGD), and solute carrier organic anion transporter family member 2A1 (SLCO2A1) PGE(2) pathway-related genes with gastric cancer (GC) risk in a European Caucasian population. A hospital-based case-control study gathering 260 GC cases and 476 cancer-free controls was implemented. Using a tagSNP approach, 51 single nucleotide polymorphisms (SNPs) were genotyped through MassARRAY(®) iPLEX Gold Technology or allelic discrimination by real-time polymerase chain reaction (PCR). Homozygous carriers of the minor allele for both rs689466 and rs10935090 SNPs were associated with a 2.98 and 4.30-fold increased risk for GC, respectively (95% confidence interval (CI): 1.14–7.74, p = 0.027; 95% CI: 1.22–15.16, p = 0.026), with the latter also being associated with an anticipated diagnosis age. A multifactor dimensionality reduction analysis identified an overall three-factor best interactive model composed of age, rs689466, and rs1678374 that was associated with a 17.6-fold GC increased risk (95% CI: 11.67–26.48, p < 0.0001, (cross-validation) CV consistency of 8/10 and accuracy of 0.807). In this preliminary study, several tagSNPs in PGE(2) pathway-related genes were identified as risk biomarkers for GC development. This approach may help to identify higher-risk individuals and may contribute to the tailoring screening of GC in intermediate-risk European countries. MDPI 2021-01-11 /pmc/articles/PMC7827533/ /pubmed/33440718 http://dx.doi.org/10.3390/ijms22020648 Text en © 2021 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Lopes, Catarina
Pereira, Carina
Farinha, Mónica
Medeiros, Rui
Dinis-Ribeiro, Mário
Genetic Variations in Prostaglandin E(2) Pathway Identified as Susceptibility Biomarkers for Gastric Cancer in an Intermediate Risk European Country
title Genetic Variations in Prostaglandin E(2) Pathway Identified as Susceptibility Biomarkers for Gastric Cancer in an Intermediate Risk European Country
title_full Genetic Variations in Prostaglandin E(2) Pathway Identified as Susceptibility Biomarkers for Gastric Cancer in an Intermediate Risk European Country
title_fullStr Genetic Variations in Prostaglandin E(2) Pathway Identified as Susceptibility Biomarkers for Gastric Cancer in an Intermediate Risk European Country
title_full_unstemmed Genetic Variations in Prostaglandin E(2) Pathway Identified as Susceptibility Biomarkers for Gastric Cancer in an Intermediate Risk European Country
title_short Genetic Variations in Prostaglandin E(2) Pathway Identified as Susceptibility Biomarkers for Gastric Cancer in an Intermediate Risk European Country
title_sort genetic variations in prostaglandin e(2) pathway identified as susceptibility biomarkers for gastric cancer in an intermediate risk european country
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7827533/
https://www.ncbi.nlm.nih.gov/pubmed/33440718
http://dx.doi.org/10.3390/ijms22020648
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