Cargando…

Structure-Activity Relationship Modeling and Experimental Validation of the Imidazolium and Pyridinium Based Ionic Liquids as Potential Antibacterials of MDR Acinetobacter baumannii and Staphylococcus aureus

Online Chemical Modeling Environment (OCHEM) was used for QSAR analysis of a set of ionic liquids (ILs) tested against multi-drug resistant (MDR) clinical isolate Acinetobacter baumannii and Staphylococcus aureus strains. The predictive accuracy of regression models has coefficient of determination...

Descripción completa

Detalles Bibliográficos
Autores principales: Semenyuta, Ivan V., Trush, Maria M., Kovalishyn, Vasyl V., Rogalsky, Sergiy P., Hodyna, Diana M., Karpov, Pavel, Xia, Zhonghua, Tetko, Igor V., Metelytsia, Larisa O.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7827895/
https://www.ncbi.nlm.nih.gov/pubmed/33429999
http://dx.doi.org/10.3390/ijms22020563
_version_ 1783640878682734592
author Semenyuta, Ivan V.
Trush, Maria M.
Kovalishyn, Vasyl V.
Rogalsky, Sergiy P.
Hodyna, Diana M.
Karpov, Pavel
Xia, Zhonghua
Tetko, Igor V.
Metelytsia, Larisa O.
author_facet Semenyuta, Ivan V.
Trush, Maria M.
Kovalishyn, Vasyl V.
Rogalsky, Sergiy P.
Hodyna, Diana M.
Karpov, Pavel
Xia, Zhonghua
Tetko, Igor V.
Metelytsia, Larisa O.
author_sort Semenyuta, Ivan V.
collection PubMed
description Online Chemical Modeling Environment (OCHEM) was used for QSAR analysis of a set of ionic liquids (ILs) tested against multi-drug resistant (MDR) clinical isolate Acinetobacter baumannii and Staphylococcus aureus strains. The predictive accuracy of regression models has coefficient of determination q(2) = 0.66 − 0.79 with cross-validation and independent test sets. The models were used to screen a virtual chemical library of ILs, which was designed with targeted activity against MDR Acinetobacter baumannii and Staphylococcus aureus strains. Seven most promising ILs were selected, synthesized, and tested. Three ILs showed high activity against both these MDR clinical isolates.
format Online
Article
Text
id pubmed-7827895
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-78278952021-01-25 Structure-Activity Relationship Modeling and Experimental Validation of the Imidazolium and Pyridinium Based Ionic Liquids as Potential Antibacterials of MDR Acinetobacter baumannii and Staphylococcus aureus Semenyuta, Ivan V. Trush, Maria M. Kovalishyn, Vasyl V. Rogalsky, Sergiy P. Hodyna, Diana M. Karpov, Pavel Xia, Zhonghua Tetko, Igor V. Metelytsia, Larisa O. Int J Mol Sci Article Online Chemical Modeling Environment (OCHEM) was used for QSAR analysis of a set of ionic liquids (ILs) tested against multi-drug resistant (MDR) clinical isolate Acinetobacter baumannii and Staphylococcus aureus strains. The predictive accuracy of regression models has coefficient of determination q(2) = 0.66 − 0.79 with cross-validation and independent test sets. The models were used to screen a virtual chemical library of ILs, which was designed with targeted activity against MDR Acinetobacter baumannii and Staphylococcus aureus strains. Seven most promising ILs were selected, synthesized, and tested. Three ILs showed high activity against both these MDR clinical isolates. MDPI 2021-01-08 /pmc/articles/PMC7827895/ /pubmed/33429999 http://dx.doi.org/10.3390/ijms22020563 Text en © 2021 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Semenyuta, Ivan V.
Trush, Maria M.
Kovalishyn, Vasyl V.
Rogalsky, Sergiy P.
Hodyna, Diana M.
Karpov, Pavel
Xia, Zhonghua
Tetko, Igor V.
Metelytsia, Larisa O.
Structure-Activity Relationship Modeling and Experimental Validation of the Imidazolium and Pyridinium Based Ionic Liquids as Potential Antibacterials of MDR Acinetobacter baumannii and Staphylococcus aureus
title Structure-Activity Relationship Modeling and Experimental Validation of the Imidazolium and Pyridinium Based Ionic Liquids as Potential Antibacterials of MDR Acinetobacter baumannii and Staphylococcus aureus
title_full Structure-Activity Relationship Modeling and Experimental Validation of the Imidazolium and Pyridinium Based Ionic Liquids as Potential Antibacterials of MDR Acinetobacter baumannii and Staphylococcus aureus
title_fullStr Structure-Activity Relationship Modeling and Experimental Validation of the Imidazolium and Pyridinium Based Ionic Liquids as Potential Antibacterials of MDR Acinetobacter baumannii and Staphylococcus aureus
title_full_unstemmed Structure-Activity Relationship Modeling and Experimental Validation of the Imidazolium and Pyridinium Based Ionic Liquids as Potential Antibacterials of MDR Acinetobacter baumannii and Staphylococcus aureus
title_short Structure-Activity Relationship Modeling and Experimental Validation of the Imidazolium and Pyridinium Based Ionic Liquids as Potential Antibacterials of MDR Acinetobacter baumannii and Staphylococcus aureus
title_sort structure-activity relationship modeling and experimental validation of the imidazolium and pyridinium based ionic liquids as potential antibacterials of mdr acinetobacter baumannii and staphylococcus aureus
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7827895/
https://www.ncbi.nlm.nih.gov/pubmed/33429999
http://dx.doi.org/10.3390/ijms22020563
work_keys_str_mv AT semenyutaivanv structureactivityrelationshipmodelingandexperimentalvalidationoftheimidazoliumandpyridiniumbasedionicliquidsaspotentialantibacterialsofmdracinetobacterbaumanniiandstaphylococcusaureus
AT trushmariam structureactivityrelationshipmodelingandexperimentalvalidationoftheimidazoliumandpyridiniumbasedionicliquidsaspotentialantibacterialsofmdracinetobacterbaumanniiandstaphylococcusaureus
AT kovalishynvasylv structureactivityrelationshipmodelingandexperimentalvalidationoftheimidazoliumandpyridiniumbasedionicliquidsaspotentialantibacterialsofmdracinetobacterbaumanniiandstaphylococcusaureus
AT rogalskysergiyp structureactivityrelationshipmodelingandexperimentalvalidationoftheimidazoliumandpyridiniumbasedionicliquidsaspotentialantibacterialsofmdracinetobacterbaumanniiandstaphylococcusaureus
AT hodynadianam structureactivityrelationshipmodelingandexperimentalvalidationoftheimidazoliumandpyridiniumbasedionicliquidsaspotentialantibacterialsofmdracinetobacterbaumanniiandstaphylococcusaureus
AT karpovpavel structureactivityrelationshipmodelingandexperimentalvalidationoftheimidazoliumandpyridiniumbasedionicliquidsaspotentialantibacterialsofmdracinetobacterbaumanniiandstaphylococcusaureus
AT xiazhonghua structureactivityrelationshipmodelingandexperimentalvalidationoftheimidazoliumandpyridiniumbasedionicliquidsaspotentialantibacterialsofmdracinetobacterbaumanniiandstaphylococcusaureus
AT tetkoigorv structureactivityrelationshipmodelingandexperimentalvalidationoftheimidazoliumandpyridiniumbasedionicliquidsaspotentialantibacterialsofmdracinetobacterbaumanniiandstaphylococcusaureus
AT metelytsialarisao structureactivityrelationshipmodelingandexperimentalvalidationoftheimidazoliumandpyridiniumbasedionicliquidsaspotentialantibacterialsofmdracinetobacterbaumanniiandstaphylococcusaureus