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Characterization of a new multidrug-resistant Brazilian K. pneumoniae isolate and 172 Klebsiella spp. sequenced strains: Genomic island, multilocus sequence typing and capsule locus dataset

The genus Klebsiella comprises species that cause nosocomial and community-acquired infections. A dataset was created to compile the sequence type (ST) and capsule type (K-locus) information predicted for 172 worldwide isolates of Klebsiella spp. whose complete genomes could be retrieved from the Ge...

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Autores principales: Profeta, Rodrigo, Seyffert, Núbia, Tiwari, Sandeep, Viana, Marcus V.C., Jaiswal, Arun Kumar, Caetano, Ana Carolina, Bücker, Daniel Henrique, de Oliveira, Luciana Tavares, Santos, Roselane, Gala-Garcia, Alfonso, Kato, Rodrigo B., Padilha, Francine F., Lima-Verde, Isabel B., Ghosh, Preetam, Barh, Debmalya, Góes-Neto, Aristóteles, Figueiredo, Henrique C.P., Soares, Siomar C., Meyer, Roberto, Brenig, Bertram, Ramos, Pablo I.P., Azevedo, Vasco, Castro, Thiago L.P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7829145/
https://www.ncbi.nlm.nih.gov/pubmed/33532526
http://dx.doi.org/10.1016/j.dib.2021.106746
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author Profeta, Rodrigo
Seyffert, Núbia
Tiwari, Sandeep
Viana, Marcus V.C.
Jaiswal, Arun Kumar
Caetano, Ana Carolina
Bücker, Daniel Henrique
de Oliveira, Luciana Tavares
Santos, Roselane
Gala-Garcia, Alfonso
Kato, Rodrigo B.
Padilha, Francine F.
Lima-Verde, Isabel B.
Ghosh, Preetam
Barh, Debmalya
Góes-Neto, Aristóteles
Figueiredo, Henrique C.P.
Soares, Siomar C.
Meyer, Roberto
Brenig, Bertram
Ramos, Pablo I.P.
Azevedo, Vasco
Castro, Thiago L.P.
author_facet Profeta, Rodrigo
Seyffert, Núbia
Tiwari, Sandeep
Viana, Marcus V.C.
Jaiswal, Arun Kumar
Caetano, Ana Carolina
Bücker, Daniel Henrique
de Oliveira, Luciana Tavares
Santos, Roselane
Gala-Garcia, Alfonso
Kato, Rodrigo B.
Padilha, Francine F.
Lima-Verde, Isabel B.
Ghosh, Preetam
Barh, Debmalya
Góes-Neto, Aristóteles
Figueiredo, Henrique C.P.
Soares, Siomar C.
Meyer, Roberto
Brenig, Bertram
Ramos, Pablo I.P.
Azevedo, Vasco
Castro, Thiago L.P.
author_sort Profeta, Rodrigo
collection PubMed
description The genus Klebsiella comprises species that cause nosocomial and community-acquired infections. A dataset was created to compile the sequence type (ST) and capsule type (K-locus) information predicted for 172 worldwide isolates of Klebsiella spp. whose complete genomes could be retrieved from the GenBank (NCBI) repository. The dataset also includes information related to one multidrug-resistant strain (B31) isolated from a patient who was admitted to an intensive care unit in the Northeast region of Brazil. This strain was phenotypically characterized and submitted to whole-genome sequencing and comparative genomics analysis as we recently reported [1]. The dataset also compiles information on Pathogenicity Islands (PIs), Resistance Islands (RIs) and Miscellaneous Islands (MIS) present in the genome of strain B31. The information provided here may support outbreak prevention policies and future epidemiological studies involving Klebsiella spp.
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spelling pubmed-78291452021-02-01 Characterization of a new multidrug-resistant Brazilian K. pneumoniae isolate and 172 Klebsiella spp. sequenced strains: Genomic island, multilocus sequence typing and capsule locus dataset Profeta, Rodrigo Seyffert, Núbia Tiwari, Sandeep Viana, Marcus V.C. Jaiswal, Arun Kumar Caetano, Ana Carolina Bücker, Daniel Henrique de Oliveira, Luciana Tavares Santos, Roselane Gala-Garcia, Alfonso Kato, Rodrigo B. Padilha, Francine F. Lima-Verde, Isabel B. Ghosh, Preetam Barh, Debmalya Góes-Neto, Aristóteles Figueiredo, Henrique C.P. Soares, Siomar C. Meyer, Roberto Brenig, Bertram Ramos, Pablo I.P. Azevedo, Vasco Castro, Thiago L.P. Data Brief Data Article The genus Klebsiella comprises species that cause nosocomial and community-acquired infections. A dataset was created to compile the sequence type (ST) and capsule type (K-locus) information predicted for 172 worldwide isolates of Klebsiella spp. whose complete genomes could be retrieved from the GenBank (NCBI) repository. The dataset also includes information related to one multidrug-resistant strain (B31) isolated from a patient who was admitted to an intensive care unit in the Northeast region of Brazil. This strain was phenotypically characterized and submitted to whole-genome sequencing and comparative genomics analysis as we recently reported [1]. The dataset also compiles information on Pathogenicity Islands (PIs), Resistance Islands (RIs) and Miscellaneous Islands (MIS) present in the genome of strain B31. The information provided here may support outbreak prevention policies and future epidemiological studies involving Klebsiella spp. Elsevier 2021-01-14 /pmc/articles/PMC7829145/ /pubmed/33532526 http://dx.doi.org/10.1016/j.dib.2021.106746 Text en © 2021 Published by Elsevier Inc. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Data Article
Profeta, Rodrigo
Seyffert, Núbia
Tiwari, Sandeep
Viana, Marcus V.C.
Jaiswal, Arun Kumar
Caetano, Ana Carolina
Bücker, Daniel Henrique
de Oliveira, Luciana Tavares
Santos, Roselane
Gala-Garcia, Alfonso
Kato, Rodrigo B.
Padilha, Francine F.
Lima-Verde, Isabel B.
Ghosh, Preetam
Barh, Debmalya
Góes-Neto, Aristóteles
Figueiredo, Henrique C.P.
Soares, Siomar C.
Meyer, Roberto
Brenig, Bertram
Ramos, Pablo I.P.
Azevedo, Vasco
Castro, Thiago L.P.
Characterization of a new multidrug-resistant Brazilian K. pneumoniae isolate and 172 Klebsiella spp. sequenced strains: Genomic island, multilocus sequence typing and capsule locus dataset
title Characterization of a new multidrug-resistant Brazilian K. pneumoniae isolate and 172 Klebsiella spp. sequenced strains: Genomic island, multilocus sequence typing and capsule locus dataset
title_full Characterization of a new multidrug-resistant Brazilian K. pneumoniae isolate and 172 Klebsiella spp. sequenced strains: Genomic island, multilocus sequence typing and capsule locus dataset
title_fullStr Characterization of a new multidrug-resistant Brazilian K. pneumoniae isolate and 172 Klebsiella spp. sequenced strains: Genomic island, multilocus sequence typing and capsule locus dataset
title_full_unstemmed Characterization of a new multidrug-resistant Brazilian K. pneumoniae isolate and 172 Klebsiella spp. sequenced strains: Genomic island, multilocus sequence typing and capsule locus dataset
title_short Characterization of a new multidrug-resistant Brazilian K. pneumoniae isolate and 172 Klebsiella spp. sequenced strains: Genomic island, multilocus sequence typing and capsule locus dataset
title_sort characterization of a new multidrug-resistant brazilian k. pneumoniae isolate and 172 klebsiella spp. sequenced strains: genomic island, multilocus sequence typing and capsule locus dataset
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7829145/
https://www.ncbi.nlm.nih.gov/pubmed/33532526
http://dx.doi.org/10.1016/j.dib.2021.106746
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