Cargando…
Characterization of a new multidrug-resistant Brazilian K. pneumoniae isolate and 172 Klebsiella spp. sequenced strains: Genomic island, multilocus sequence typing and capsule locus dataset
The genus Klebsiella comprises species that cause nosocomial and community-acquired infections. A dataset was created to compile the sequence type (ST) and capsule type (K-locus) information predicted for 172 worldwide isolates of Klebsiella spp. whose complete genomes could be retrieved from the Ge...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7829145/ https://www.ncbi.nlm.nih.gov/pubmed/33532526 http://dx.doi.org/10.1016/j.dib.2021.106746 |
_version_ | 1783641127725826048 |
---|---|
author | Profeta, Rodrigo Seyffert, Núbia Tiwari, Sandeep Viana, Marcus V.C. Jaiswal, Arun Kumar Caetano, Ana Carolina Bücker, Daniel Henrique de Oliveira, Luciana Tavares Santos, Roselane Gala-Garcia, Alfonso Kato, Rodrigo B. Padilha, Francine F. Lima-Verde, Isabel B. Ghosh, Preetam Barh, Debmalya Góes-Neto, Aristóteles Figueiredo, Henrique C.P. Soares, Siomar C. Meyer, Roberto Brenig, Bertram Ramos, Pablo I.P. Azevedo, Vasco Castro, Thiago L.P. |
author_facet | Profeta, Rodrigo Seyffert, Núbia Tiwari, Sandeep Viana, Marcus V.C. Jaiswal, Arun Kumar Caetano, Ana Carolina Bücker, Daniel Henrique de Oliveira, Luciana Tavares Santos, Roselane Gala-Garcia, Alfonso Kato, Rodrigo B. Padilha, Francine F. Lima-Verde, Isabel B. Ghosh, Preetam Barh, Debmalya Góes-Neto, Aristóteles Figueiredo, Henrique C.P. Soares, Siomar C. Meyer, Roberto Brenig, Bertram Ramos, Pablo I.P. Azevedo, Vasco Castro, Thiago L.P. |
author_sort | Profeta, Rodrigo |
collection | PubMed |
description | The genus Klebsiella comprises species that cause nosocomial and community-acquired infections. A dataset was created to compile the sequence type (ST) and capsule type (K-locus) information predicted for 172 worldwide isolates of Klebsiella spp. whose complete genomes could be retrieved from the GenBank (NCBI) repository. The dataset also includes information related to one multidrug-resistant strain (B31) isolated from a patient who was admitted to an intensive care unit in the Northeast region of Brazil. This strain was phenotypically characterized and submitted to whole-genome sequencing and comparative genomics analysis as we recently reported [1]. The dataset also compiles information on Pathogenicity Islands (PIs), Resistance Islands (RIs) and Miscellaneous Islands (MIS) present in the genome of strain B31. The information provided here may support outbreak prevention policies and future epidemiological studies involving Klebsiella spp. |
format | Online Article Text |
id | pubmed-7829145 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-78291452021-02-01 Characterization of a new multidrug-resistant Brazilian K. pneumoniae isolate and 172 Klebsiella spp. sequenced strains: Genomic island, multilocus sequence typing and capsule locus dataset Profeta, Rodrigo Seyffert, Núbia Tiwari, Sandeep Viana, Marcus V.C. Jaiswal, Arun Kumar Caetano, Ana Carolina Bücker, Daniel Henrique de Oliveira, Luciana Tavares Santos, Roselane Gala-Garcia, Alfonso Kato, Rodrigo B. Padilha, Francine F. Lima-Verde, Isabel B. Ghosh, Preetam Barh, Debmalya Góes-Neto, Aristóteles Figueiredo, Henrique C.P. Soares, Siomar C. Meyer, Roberto Brenig, Bertram Ramos, Pablo I.P. Azevedo, Vasco Castro, Thiago L.P. Data Brief Data Article The genus Klebsiella comprises species that cause nosocomial and community-acquired infections. A dataset was created to compile the sequence type (ST) and capsule type (K-locus) information predicted for 172 worldwide isolates of Klebsiella spp. whose complete genomes could be retrieved from the GenBank (NCBI) repository. The dataset also includes information related to one multidrug-resistant strain (B31) isolated from a patient who was admitted to an intensive care unit in the Northeast region of Brazil. This strain was phenotypically characterized and submitted to whole-genome sequencing and comparative genomics analysis as we recently reported [1]. The dataset also compiles information on Pathogenicity Islands (PIs), Resistance Islands (RIs) and Miscellaneous Islands (MIS) present in the genome of strain B31. The information provided here may support outbreak prevention policies and future epidemiological studies involving Klebsiella spp. Elsevier 2021-01-14 /pmc/articles/PMC7829145/ /pubmed/33532526 http://dx.doi.org/10.1016/j.dib.2021.106746 Text en © 2021 Published by Elsevier Inc. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Data Article Profeta, Rodrigo Seyffert, Núbia Tiwari, Sandeep Viana, Marcus V.C. Jaiswal, Arun Kumar Caetano, Ana Carolina Bücker, Daniel Henrique de Oliveira, Luciana Tavares Santos, Roselane Gala-Garcia, Alfonso Kato, Rodrigo B. Padilha, Francine F. Lima-Verde, Isabel B. Ghosh, Preetam Barh, Debmalya Góes-Neto, Aristóteles Figueiredo, Henrique C.P. Soares, Siomar C. Meyer, Roberto Brenig, Bertram Ramos, Pablo I.P. Azevedo, Vasco Castro, Thiago L.P. Characterization of a new multidrug-resistant Brazilian K. pneumoniae isolate and 172 Klebsiella spp. sequenced strains: Genomic island, multilocus sequence typing and capsule locus dataset |
title | Characterization of a new multidrug-resistant Brazilian K. pneumoniae isolate and 172 Klebsiella spp. sequenced strains: Genomic island, multilocus sequence typing and capsule locus dataset |
title_full | Characterization of a new multidrug-resistant Brazilian K. pneumoniae isolate and 172 Klebsiella spp. sequenced strains: Genomic island, multilocus sequence typing and capsule locus dataset |
title_fullStr | Characterization of a new multidrug-resistant Brazilian K. pneumoniae isolate and 172 Klebsiella spp. sequenced strains: Genomic island, multilocus sequence typing and capsule locus dataset |
title_full_unstemmed | Characterization of a new multidrug-resistant Brazilian K. pneumoniae isolate and 172 Klebsiella spp. sequenced strains: Genomic island, multilocus sequence typing and capsule locus dataset |
title_short | Characterization of a new multidrug-resistant Brazilian K. pneumoniae isolate and 172 Klebsiella spp. sequenced strains: Genomic island, multilocus sequence typing and capsule locus dataset |
title_sort | characterization of a new multidrug-resistant brazilian k. pneumoniae isolate and 172 klebsiella spp. sequenced strains: genomic island, multilocus sequence typing and capsule locus dataset |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7829145/ https://www.ncbi.nlm.nih.gov/pubmed/33532526 http://dx.doi.org/10.1016/j.dib.2021.106746 |
work_keys_str_mv | AT profetarodrigo characterizationofanewmultidrugresistantbraziliankpneumoniaeisolateand172klebsiellasppsequencedstrainsgenomicislandmultilocussequencetypingandcapsulelocusdataset AT seyffertnubia characterizationofanewmultidrugresistantbraziliankpneumoniaeisolateand172klebsiellasppsequencedstrainsgenomicislandmultilocussequencetypingandcapsulelocusdataset AT tiwarisandeep characterizationofanewmultidrugresistantbraziliankpneumoniaeisolateand172klebsiellasppsequencedstrainsgenomicislandmultilocussequencetypingandcapsulelocusdataset AT vianamarcusvc characterizationofanewmultidrugresistantbraziliankpneumoniaeisolateand172klebsiellasppsequencedstrainsgenomicislandmultilocussequencetypingandcapsulelocusdataset AT jaiswalarunkumar characterizationofanewmultidrugresistantbraziliankpneumoniaeisolateand172klebsiellasppsequencedstrainsgenomicislandmultilocussequencetypingandcapsulelocusdataset AT caetanoanacarolina characterizationofanewmultidrugresistantbraziliankpneumoniaeisolateand172klebsiellasppsequencedstrainsgenomicislandmultilocussequencetypingandcapsulelocusdataset AT buckerdanielhenrique characterizationofanewmultidrugresistantbraziliankpneumoniaeisolateand172klebsiellasppsequencedstrainsgenomicislandmultilocussequencetypingandcapsulelocusdataset AT deoliveiralucianatavares characterizationofanewmultidrugresistantbraziliankpneumoniaeisolateand172klebsiellasppsequencedstrainsgenomicislandmultilocussequencetypingandcapsulelocusdataset AT santosroselane characterizationofanewmultidrugresistantbraziliankpneumoniaeisolateand172klebsiellasppsequencedstrainsgenomicislandmultilocussequencetypingandcapsulelocusdataset AT galagarciaalfonso characterizationofanewmultidrugresistantbraziliankpneumoniaeisolateand172klebsiellasppsequencedstrainsgenomicislandmultilocussequencetypingandcapsulelocusdataset AT katorodrigob characterizationofanewmultidrugresistantbraziliankpneumoniaeisolateand172klebsiellasppsequencedstrainsgenomicislandmultilocussequencetypingandcapsulelocusdataset AT padilhafrancinef characterizationofanewmultidrugresistantbraziliankpneumoniaeisolateand172klebsiellasppsequencedstrainsgenomicislandmultilocussequencetypingandcapsulelocusdataset AT limaverdeisabelb characterizationofanewmultidrugresistantbraziliankpneumoniaeisolateand172klebsiellasppsequencedstrainsgenomicislandmultilocussequencetypingandcapsulelocusdataset AT ghoshpreetam characterizationofanewmultidrugresistantbraziliankpneumoniaeisolateand172klebsiellasppsequencedstrainsgenomicislandmultilocussequencetypingandcapsulelocusdataset AT barhdebmalya characterizationofanewmultidrugresistantbraziliankpneumoniaeisolateand172klebsiellasppsequencedstrainsgenomicislandmultilocussequencetypingandcapsulelocusdataset AT goesnetoaristoteles characterizationofanewmultidrugresistantbraziliankpneumoniaeisolateand172klebsiellasppsequencedstrainsgenomicislandmultilocussequencetypingandcapsulelocusdataset AT figueiredohenriquecp characterizationofanewmultidrugresistantbraziliankpneumoniaeisolateand172klebsiellasppsequencedstrainsgenomicislandmultilocussequencetypingandcapsulelocusdataset AT soaressiomarc characterizationofanewmultidrugresistantbraziliankpneumoniaeisolateand172klebsiellasppsequencedstrainsgenomicislandmultilocussequencetypingandcapsulelocusdataset AT meyerroberto characterizationofanewmultidrugresistantbraziliankpneumoniaeisolateand172klebsiellasppsequencedstrainsgenomicislandmultilocussequencetypingandcapsulelocusdataset AT brenigbertram characterizationofanewmultidrugresistantbraziliankpneumoniaeisolateand172klebsiellasppsequencedstrainsgenomicislandmultilocussequencetypingandcapsulelocusdataset AT ramospabloip characterizationofanewmultidrugresistantbraziliankpneumoniaeisolateand172klebsiellasppsequencedstrainsgenomicislandmultilocussequencetypingandcapsulelocusdataset AT azevedovasco characterizationofanewmultidrugresistantbraziliankpneumoniaeisolateand172klebsiellasppsequencedstrainsgenomicislandmultilocussequencetypingandcapsulelocusdataset AT castrothiagolp characterizationofanewmultidrugresistantbraziliankpneumoniaeisolateand172klebsiellasppsequencedstrainsgenomicislandmultilocussequencetypingandcapsulelocusdataset |