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X-Linked Retinitis Pigmentosa Caused by Non-Canonical Splice Site Variants in RPGR

We aimed to validate the effect of non-canonical splice site variants in the RPGR gene in five patients from four families diagnosed with retinitis pigmentosa. Four variants located in intron 2 (c.154 + 3_154 + 6del), intron 3 (c.247 + 5G>A), intron 7 (c.779-5T>G), and intron 13 (c.1573-12A>...

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Autores principales: Kortüm, Friederike, Kieninger, Sinja, Mazzola, Pascale, Kohl, Susanne, Wissinger, Bernd, Prokisch, Holger, Stingl, Katarina, Weisschuh, Nicole
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7830253/
https://www.ncbi.nlm.nih.gov/pubmed/33467000
http://dx.doi.org/10.3390/ijms22020850
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author Kortüm, Friederike
Kieninger, Sinja
Mazzola, Pascale
Kohl, Susanne
Wissinger, Bernd
Prokisch, Holger
Stingl, Katarina
Weisschuh, Nicole
author_facet Kortüm, Friederike
Kieninger, Sinja
Mazzola, Pascale
Kohl, Susanne
Wissinger, Bernd
Prokisch, Holger
Stingl, Katarina
Weisschuh, Nicole
author_sort Kortüm, Friederike
collection PubMed
description We aimed to validate the effect of non-canonical splice site variants in the RPGR gene in five patients from four families diagnosed with retinitis pigmentosa. Four variants located in intron 2 (c.154 + 3_154 + 6del), intron 3 (c.247 + 5G>A), intron 7 (c.779-5T>G), and intron 13 (c.1573-12A>G), respectively, were analyzed by means of in vitro splice assays. Splicing analysis revealed different aberrant splicing events, including exon skipping and intronic nucleotide addition, which are predicted to lead either to an in-frame deletion affecting relevant protein domains or to a frameshift of the open reading frame. Our data expand the landscape of pathogenic variants in RPGR, thereby increasing the genetic diagnostic rate in retinitis pigmentosa and allowing patients harboring the analyzed variants to be enrolled in clinical trials.
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spelling pubmed-78302532021-01-26 X-Linked Retinitis Pigmentosa Caused by Non-Canonical Splice Site Variants in RPGR Kortüm, Friederike Kieninger, Sinja Mazzola, Pascale Kohl, Susanne Wissinger, Bernd Prokisch, Holger Stingl, Katarina Weisschuh, Nicole Int J Mol Sci Article We aimed to validate the effect of non-canonical splice site variants in the RPGR gene in five patients from four families diagnosed with retinitis pigmentosa. Four variants located in intron 2 (c.154 + 3_154 + 6del), intron 3 (c.247 + 5G>A), intron 7 (c.779-5T>G), and intron 13 (c.1573-12A>G), respectively, were analyzed by means of in vitro splice assays. Splicing analysis revealed different aberrant splicing events, including exon skipping and intronic nucleotide addition, which are predicted to lead either to an in-frame deletion affecting relevant protein domains or to a frameshift of the open reading frame. Our data expand the landscape of pathogenic variants in RPGR, thereby increasing the genetic diagnostic rate in retinitis pigmentosa and allowing patients harboring the analyzed variants to be enrolled in clinical trials. MDPI 2021-01-16 /pmc/articles/PMC7830253/ /pubmed/33467000 http://dx.doi.org/10.3390/ijms22020850 Text en © 2021 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Kortüm, Friederike
Kieninger, Sinja
Mazzola, Pascale
Kohl, Susanne
Wissinger, Bernd
Prokisch, Holger
Stingl, Katarina
Weisschuh, Nicole
X-Linked Retinitis Pigmentosa Caused by Non-Canonical Splice Site Variants in RPGR
title X-Linked Retinitis Pigmentosa Caused by Non-Canonical Splice Site Variants in RPGR
title_full X-Linked Retinitis Pigmentosa Caused by Non-Canonical Splice Site Variants in RPGR
title_fullStr X-Linked Retinitis Pigmentosa Caused by Non-Canonical Splice Site Variants in RPGR
title_full_unstemmed X-Linked Retinitis Pigmentosa Caused by Non-Canonical Splice Site Variants in RPGR
title_short X-Linked Retinitis Pigmentosa Caused by Non-Canonical Splice Site Variants in RPGR
title_sort x-linked retinitis pigmentosa caused by non-canonical splice site variants in rpgr
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7830253/
https://www.ncbi.nlm.nih.gov/pubmed/33467000
http://dx.doi.org/10.3390/ijms22020850
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