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X-Linked Retinitis Pigmentosa Caused by Non-Canonical Splice Site Variants in RPGR
We aimed to validate the effect of non-canonical splice site variants in the RPGR gene in five patients from four families diagnosed with retinitis pigmentosa. Four variants located in intron 2 (c.154 + 3_154 + 6del), intron 3 (c.247 + 5G>A), intron 7 (c.779-5T>G), and intron 13 (c.1573-12A>...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7830253/ https://www.ncbi.nlm.nih.gov/pubmed/33467000 http://dx.doi.org/10.3390/ijms22020850 |
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author | Kortüm, Friederike Kieninger, Sinja Mazzola, Pascale Kohl, Susanne Wissinger, Bernd Prokisch, Holger Stingl, Katarina Weisschuh, Nicole |
author_facet | Kortüm, Friederike Kieninger, Sinja Mazzola, Pascale Kohl, Susanne Wissinger, Bernd Prokisch, Holger Stingl, Katarina Weisschuh, Nicole |
author_sort | Kortüm, Friederike |
collection | PubMed |
description | We aimed to validate the effect of non-canonical splice site variants in the RPGR gene in five patients from four families diagnosed with retinitis pigmentosa. Four variants located in intron 2 (c.154 + 3_154 + 6del), intron 3 (c.247 + 5G>A), intron 7 (c.779-5T>G), and intron 13 (c.1573-12A>G), respectively, were analyzed by means of in vitro splice assays. Splicing analysis revealed different aberrant splicing events, including exon skipping and intronic nucleotide addition, which are predicted to lead either to an in-frame deletion affecting relevant protein domains or to a frameshift of the open reading frame. Our data expand the landscape of pathogenic variants in RPGR, thereby increasing the genetic diagnostic rate in retinitis pigmentosa and allowing patients harboring the analyzed variants to be enrolled in clinical trials. |
format | Online Article Text |
id | pubmed-7830253 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-78302532021-01-26 X-Linked Retinitis Pigmentosa Caused by Non-Canonical Splice Site Variants in RPGR Kortüm, Friederike Kieninger, Sinja Mazzola, Pascale Kohl, Susanne Wissinger, Bernd Prokisch, Holger Stingl, Katarina Weisschuh, Nicole Int J Mol Sci Article We aimed to validate the effect of non-canonical splice site variants in the RPGR gene in five patients from four families diagnosed with retinitis pigmentosa. Four variants located in intron 2 (c.154 + 3_154 + 6del), intron 3 (c.247 + 5G>A), intron 7 (c.779-5T>G), and intron 13 (c.1573-12A>G), respectively, were analyzed by means of in vitro splice assays. Splicing analysis revealed different aberrant splicing events, including exon skipping and intronic nucleotide addition, which are predicted to lead either to an in-frame deletion affecting relevant protein domains or to a frameshift of the open reading frame. Our data expand the landscape of pathogenic variants in RPGR, thereby increasing the genetic diagnostic rate in retinitis pigmentosa and allowing patients harboring the analyzed variants to be enrolled in clinical trials. MDPI 2021-01-16 /pmc/articles/PMC7830253/ /pubmed/33467000 http://dx.doi.org/10.3390/ijms22020850 Text en © 2021 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Kortüm, Friederike Kieninger, Sinja Mazzola, Pascale Kohl, Susanne Wissinger, Bernd Prokisch, Holger Stingl, Katarina Weisschuh, Nicole X-Linked Retinitis Pigmentosa Caused by Non-Canonical Splice Site Variants in RPGR |
title | X-Linked Retinitis Pigmentosa Caused by Non-Canonical Splice Site Variants in RPGR |
title_full | X-Linked Retinitis Pigmentosa Caused by Non-Canonical Splice Site Variants in RPGR |
title_fullStr | X-Linked Retinitis Pigmentosa Caused by Non-Canonical Splice Site Variants in RPGR |
title_full_unstemmed | X-Linked Retinitis Pigmentosa Caused by Non-Canonical Splice Site Variants in RPGR |
title_short | X-Linked Retinitis Pigmentosa Caused by Non-Canonical Splice Site Variants in RPGR |
title_sort | x-linked retinitis pigmentosa caused by non-canonical splice site variants in rpgr |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7830253/ https://www.ncbi.nlm.nih.gov/pubmed/33467000 http://dx.doi.org/10.3390/ijms22020850 |
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