Characterization of the complete chloroplast genome sequence of Malus kansuensis (Rosaceae)

The Malus kansuensis belongs to the Malus genus of Rosaceae family and it is an important apple rootstock resource native to China. Here, its complete chloroplast genome was sequenced and assembled by high-throughput Illumina sequencing data. The DNA was circular in shape with 160,133 bp length, con...

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Detalles Bibliográficos
Autores principales: Li, Lingli, Ye, Yang, Zhao, Mengran, Xin, Haodong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7831360/
https://www.ncbi.nlm.nih.gov/pubmed/33537418
http://dx.doi.org/10.1080/23802359.2020.1847622
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author Li, Lingli
Ye, Yang
Zhao, Mengran
Xin, Haodong
author_facet Li, Lingli
Ye, Yang
Zhao, Mengran
Xin, Haodong
author_sort Li, Lingli
collection PubMed
description The Malus kansuensis belongs to the Malus genus of Rosaceae family and it is an important apple rootstock resource native to China. Here, its complete chloroplast genome was sequenced and assembled by high-throughput Illumina sequencing data. The DNA was circular in shape with 160,133 bp length, containing IRA and IRB inverted repeat regions (26,354 bp), large single-copy region (LSC) (88,141 bp), and small single-copy region (SSC)(19,284 bp). In the chloroplast genome, 129 functional genes were predicted, including 85 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. The phylogenetic tree basically accords with the traditional taxonomy of the order Malus genus of Rosaceae family.
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spelling pubmed-78313602021-02-02 Characterization of the complete chloroplast genome sequence of Malus kansuensis (Rosaceae) Li, Lingli Ye, Yang Zhao, Mengran Xin, Haodong Mitochondrial DNA B Resour Mitogenome Announcement The Malus kansuensis belongs to the Malus genus of Rosaceae family and it is an important apple rootstock resource native to China. Here, its complete chloroplast genome was sequenced and assembled by high-throughput Illumina sequencing data. The DNA was circular in shape with 160,133 bp length, containing IRA and IRB inverted repeat regions (26,354 bp), large single-copy region (LSC) (88,141 bp), and small single-copy region (SSC)(19,284 bp). In the chloroplast genome, 129 functional genes were predicted, including 85 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. The phylogenetic tree basically accords with the traditional taxonomy of the order Malus genus of Rosaceae family. Taylor & Francis 2021-01-14 /pmc/articles/PMC7831360/ /pubmed/33537418 http://dx.doi.org/10.1080/23802359.2020.1847622 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Li, Lingli
Ye, Yang
Zhao, Mengran
Xin, Haodong
Characterization of the complete chloroplast genome sequence of Malus kansuensis (Rosaceae)
title Characterization of the complete chloroplast genome sequence of Malus kansuensis (Rosaceae)
title_full Characterization of the complete chloroplast genome sequence of Malus kansuensis (Rosaceae)
title_fullStr Characterization of the complete chloroplast genome sequence of Malus kansuensis (Rosaceae)
title_full_unstemmed Characterization of the complete chloroplast genome sequence of Malus kansuensis (Rosaceae)
title_short Characterization of the complete chloroplast genome sequence of Malus kansuensis (Rosaceae)
title_sort characterization of the complete chloroplast genome sequence of malus kansuensis (rosaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7831360/
https://www.ncbi.nlm.nih.gov/pubmed/33537418
http://dx.doi.org/10.1080/23802359.2020.1847622
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AT zhaomengran characterizationofthecompletechloroplastgenomesequenceofmaluskansuensisrosaceae
AT xinhaodong characterizationofthecompletechloroplastgenomesequenceofmaluskansuensisrosaceae

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