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Explainable Deep Learning for Pulmonary Disease and Coronavirus COVID-19 Detection from X-rays

Background and Objective: Coronavirus disease (COVID-19) is an infectious disease caused by a new virus never identified before in humans. This virus causes respiratory disease (for instance, flu) with symptoms such as cough, fever and, in severe cases, pneumonia. The test to detect the presence of...

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Autores principales: Brunese, Luca, Mercaldo, Francesco, Reginelli, Alfonso, Santone, Antonella
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier B.V. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7831868/
https://www.ncbi.nlm.nih.gov/pubmed/32599338
http://dx.doi.org/10.1016/j.cmpb.2020.105608
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author Brunese, Luca
Mercaldo, Francesco
Reginelli, Alfonso
Santone, Antonella
author_facet Brunese, Luca
Mercaldo, Francesco
Reginelli, Alfonso
Santone, Antonella
author_sort Brunese, Luca
collection PubMed
description Background and Objective: Coronavirus disease (COVID-19) is an infectious disease caused by a new virus never identified before in humans. This virus causes respiratory disease (for instance, flu) with symptoms such as cough, fever and, in severe cases, pneumonia. The test to detect the presence of this virus in humans is performed on sputum or blood samples and the outcome is generally available within a few hours or, at most, days. Analysing biomedical imaging the patient shows signs of pneumonia. In this paper, with the aim of providing a fully automatic and faster diagnosis, we propose the adoption of deep learning for COVID-19 detection from X-rays. Method: In particular, we propose an approach composed by three phases: the first one to detect if in a chest X-ray there is the presence of a pneumonia. The second one to discern between COVID-19 and pneumonia. The last step is aimed to localise the areas in the X-ray symptomatic of the COVID-19 presence. Results and Conclusion: Experimental analysis on 6,523 chest X-rays belonging to different institutions demonstrated the effectiveness of the proposed approach, with an average time for COVID-19 detection of approximately 2.5 seconds and an average accuracy equal to 0.97.
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spelling pubmed-78318682021-01-26 Explainable Deep Learning for Pulmonary Disease and Coronavirus COVID-19 Detection from X-rays Brunese, Luca Mercaldo, Francesco Reginelli, Alfonso Santone, Antonella Comput Methods Programs Biomed Article Background and Objective: Coronavirus disease (COVID-19) is an infectious disease caused by a new virus never identified before in humans. This virus causes respiratory disease (for instance, flu) with symptoms such as cough, fever and, in severe cases, pneumonia. The test to detect the presence of this virus in humans is performed on sputum or blood samples and the outcome is generally available within a few hours or, at most, days. Analysing biomedical imaging the patient shows signs of pneumonia. In this paper, with the aim of providing a fully automatic and faster diagnosis, we propose the adoption of deep learning for COVID-19 detection from X-rays. Method: In particular, we propose an approach composed by three phases: the first one to detect if in a chest X-ray there is the presence of a pneumonia. The second one to discern between COVID-19 and pneumonia. The last step is aimed to localise the areas in the X-ray symptomatic of the COVID-19 presence. Results and Conclusion: Experimental analysis on 6,523 chest X-rays belonging to different institutions demonstrated the effectiveness of the proposed approach, with an average time for COVID-19 detection of approximately 2.5 seconds and an average accuracy equal to 0.97. Elsevier B.V. 2020-11 2020-06-20 /pmc/articles/PMC7831868/ /pubmed/32599338 http://dx.doi.org/10.1016/j.cmpb.2020.105608 Text en © 2020 Elsevier B.V. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Brunese, Luca
Mercaldo, Francesco
Reginelli, Alfonso
Santone, Antonella
Explainable Deep Learning for Pulmonary Disease and Coronavirus COVID-19 Detection from X-rays
title Explainable Deep Learning for Pulmonary Disease and Coronavirus COVID-19 Detection from X-rays
title_full Explainable Deep Learning for Pulmonary Disease and Coronavirus COVID-19 Detection from X-rays
title_fullStr Explainable Deep Learning for Pulmonary Disease and Coronavirus COVID-19 Detection from X-rays
title_full_unstemmed Explainable Deep Learning for Pulmonary Disease and Coronavirus COVID-19 Detection from X-rays
title_short Explainable Deep Learning for Pulmonary Disease and Coronavirus COVID-19 Detection from X-rays
title_sort explainable deep learning for pulmonary disease and coronavirus covid-19 detection from x-rays
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7831868/
https://www.ncbi.nlm.nih.gov/pubmed/32599338
http://dx.doi.org/10.1016/j.cmpb.2020.105608
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