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Characterization of the complete chloroplast genome of Sansevieria trifasciata var. Laurentii
Sansevieria trifasciata var. laurentii (S. trifasciata) is a kind of popular in-door and out-door plant around world, it is not only known as the ornamental plant, but also as medical plant. It belongs to the Draceanaceae family, Draceanaceae includes more than 60 species distributed in tropical and...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7832470/ https://www.ncbi.nlm.nih.gov/pubmed/33537442 http://dx.doi.org/10.1080/23802359.2020.1860717 |
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author | Guo, Weiyue Li, Pan Lei, Kang Ji, Lusha |
author_facet | Guo, Weiyue Li, Pan Lei, Kang Ji, Lusha |
author_sort | Guo, Weiyue |
collection | PubMed |
description | Sansevieria trifasciata var. laurentii (S. trifasciata) is a kind of popular in-door and out-door plant around world, it is not only known as the ornamental plant, but also as medical plant. It belongs to the Draceanaceae family, Draceanaceae includes more than 60 species distributed in tropical and subtropical dry climate regions. In this study, we sequenced the sample of S. trifasciata and determined its complete chloroplast genome. The length of CP genome is 155,179 bp, includes two invert repeats (IR) regions of 26,513 bp, a large single copy (LSC) region of 83,680 bp and a short single copy (SSC) region of 18,473 bp. There are 133 genes, which includes 87 protein coding genes, 8 rRNA and 38 tRNA, and 37.5% overall GC content. Each of trnK-UUU, rps16, trnG-UCC, atpF, rpoC1, trnL-UAA, trnV-UAC, petB, petD, rpl16, rpl2, ndhB, trnI-GAU, trnA-UGC and ndhA genes contains a intron, clpP and ycf3 contains 2 intron. The phylogenetic position shows that S. trifasciata has the closest relationship with Rohdea Chinensis (MH356725.1). |
format | Online Article Text |
id | pubmed-7832470 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78324702021-02-02 Characterization of the complete chloroplast genome of Sansevieria trifasciata var. Laurentii Guo, Weiyue Li, Pan Lei, Kang Ji, Lusha Mitochondrial DNA B Resour Mitogenome Announcement Sansevieria trifasciata var. laurentii (S. trifasciata) is a kind of popular in-door and out-door plant around world, it is not only known as the ornamental plant, but also as medical plant. It belongs to the Draceanaceae family, Draceanaceae includes more than 60 species distributed in tropical and subtropical dry climate regions. In this study, we sequenced the sample of S. trifasciata and determined its complete chloroplast genome. The length of CP genome is 155,179 bp, includes two invert repeats (IR) regions of 26,513 bp, a large single copy (LSC) region of 83,680 bp and a short single copy (SSC) region of 18,473 bp. There are 133 genes, which includes 87 protein coding genes, 8 rRNA and 38 tRNA, and 37.5% overall GC content. Each of trnK-UUU, rps16, trnG-UCC, atpF, rpoC1, trnL-UAA, trnV-UAC, petB, petD, rpl16, rpl2, ndhB, trnI-GAU, trnA-UGC and ndhA genes contains a intron, clpP and ycf3 contains 2 intron. The phylogenetic position shows that S. trifasciata has the closest relationship with Rohdea Chinensis (MH356725.1). Taylor & Francis 2021-01-21 /pmc/articles/PMC7832470/ /pubmed/33537442 http://dx.doi.org/10.1080/23802359.2020.1860717 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Guo, Weiyue Li, Pan Lei, Kang Ji, Lusha Characterization of the complete chloroplast genome of Sansevieria trifasciata var. Laurentii |
title | Characterization of the complete chloroplast genome of Sansevieria trifasciata var. Laurentii |
title_full | Characterization of the complete chloroplast genome of Sansevieria trifasciata var. Laurentii |
title_fullStr | Characterization of the complete chloroplast genome of Sansevieria trifasciata var. Laurentii |
title_full_unstemmed | Characterization of the complete chloroplast genome of Sansevieria trifasciata var. Laurentii |
title_short | Characterization of the complete chloroplast genome of Sansevieria trifasciata var. Laurentii |
title_sort | characterization of the complete chloroplast genome of sansevieria trifasciata var. laurentii |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7832470/ https://www.ncbi.nlm.nih.gov/pubmed/33537442 http://dx.doi.org/10.1080/23802359.2020.1860717 |
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