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Novel dual multiplex real-time RT-PCR assays for the rapid detection of SARS-CoV-2, influenza A/B, and respiratory syncytial virus using the BD MAX open system

SARS-CoV-2 has spread rapidly, causing deaths worldwide. In this study, we evaluated the performance of the BD MAX Open System module for identifying viral pathogens, including SARS-CoV-2, in nasopharyngeal specimens from individuals with symptoms of upper respiratory tract infection. We developed a...

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Autores principales: Chung, Hsing-Yi, Jian, Ming-Jr, Chang, Chih-Kai, Lin, Jung-Chung, Yeh, Kuo-Ming, Chen, Chien-Wen, Chiu, Sheng-Kang, Wang, Yi-Hui, Liao, Shu-Jung, Li, Shih-Yi, Hsieh, Shan-Shan, Tsai, Shih-Hung, Perng, Cherng-Lih, Yang, Ji-Rong, Liu, Ming-Tsan, Chang, Feng-Yee, Shang, Hung-Sheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7832498/
https://www.ncbi.nlm.nih.gov/pubmed/33410371
http://dx.doi.org/10.1080/22221751.2021.1873073
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author Chung, Hsing-Yi
Jian, Ming-Jr
Chang, Chih-Kai
Lin, Jung-Chung
Yeh, Kuo-Ming
Chen, Chien-Wen
Chiu, Sheng-Kang
Wang, Yi-Hui
Liao, Shu-Jung
Li, Shih-Yi
Hsieh, Shan-Shan
Tsai, Shih-Hung
Perng, Cherng-Lih
Yang, Ji-Rong
Liu, Ming-Tsan
Chang, Feng-Yee
Shang, Hung-Sheng
author_facet Chung, Hsing-Yi
Jian, Ming-Jr
Chang, Chih-Kai
Lin, Jung-Chung
Yeh, Kuo-Ming
Chen, Chien-Wen
Chiu, Sheng-Kang
Wang, Yi-Hui
Liao, Shu-Jung
Li, Shih-Yi
Hsieh, Shan-Shan
Tsai, Shih-Hung
Perng, Cherng-Lih
Yang, Ji-Rong
Liu, Ming-Tsan
Chang, Feng-Yee
Shang, Hung-Sheng
author_sort Chung, Hsing-Yi
collection PubMed
description SARS-CoV-2 has spread rapidly, causing deaths worldwide. In this study, we evaluated the performance of the BD MAX Open System module for identifying viral pathogens, including SARS-CoV-2, in nasopharyngeal specimens from individuals with symptoms of upper respiratory tract infection. We developed and validated a rapid total nucleic acid extraction method based on real-time reverse transcription-polymerase chain reaction (RT-PCR) for the reliable, high-throughput simultaneous detection of common cold viral pathogens using the BD MAX Platform. The system was evaluated using 205 nasopharyngeal swab clinical samples. For assessment of the limit of detection (LoD), we used SARS-CoV-2, influenza A/B, and respiratory syncytial virus (RSV) RNA standards. The BD MAX dual multiplex real-time RT-PCR panel demonstrated a sensitivity comparable to that of the World Health Organization-recommended SARS-CoV-2 assay with an LoD of 50 copies/PCR. The LoD of influenza A/B and RSV was 100–200 copies/PCR. The overall percent agreement between the BD MAX panel and laboratory-developed RT-PCR test on 55 SARS-CoV-2-positive clinical samples was 100%. Among the 55 positive cases of COVID-19 analysed, no coinfection was detected. The BD MAX rapid multiplex PCR provides a highly sensitive, robust, and accurate assay for the rapid detection of SARS-CoV-2, influenza A/B, and RSV.
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spelling pubmed-78324982021-02-02 Novel dual multiplex real-time RT-PCR assays for the rapid detection of SARS-CoV-2, influenza A/B, and respiratory syncytial virus using the BD MAX open system Chung, Hsing-Yi Jian, Ming-Jr Chang, Chih-Kai Lin, Jung-Chung Yeh, Kuo-Ming Chen, Chien-Wen Chiu, Sheng-Kang Wang, Yi-Hui Liao, Shu-Jung Li, Shih-Yi Hsieh, Shan-Shan Tsai, Shih-Hung Perng, Cherng-Lih Yang, Ji-Rong Liu, Ming-Tsan Chang, Feng-Yee Shang, Hung-Sheng Emerg Microbes Infect Coronaviruses SARS-CoV-2 has spread rapidly, causing deaths worldwide. In this study, we evaluated the performance of the BD MAX Open System module for identifying viral pathogens, including SARS-CoV-2, in nasopharyngeal specimens from individuals with symptoms of upper respiratory tract infection. We developed and validated a rapid total nucleic acid extraction method based on real-time reverse transcription-polymerase chain reaction (RT-PCR) for the reliable, high-throughput simultaneous detection of common cold viral pathogens using the BD MAX Platform. The system was evaluated using 205 nasopharyngeal swab clinical samples. For assessment of the limit of detection (LoD), we used SARS-CoV-2, influenza A/B, and respiratory syncytial virus (RSV) RNA standards. The BD MAX dual multiplex real-time RT-PCR panel demonstrated a sensitivity comparable to that of the World Health Organization-recommended SARS-CoV-2 assay with an LoD of 50 copies/PCR. The LoD of influenza A/B and RSV was 100–200 copies/PCR. The overall percent agreement between the BD MAX panel and laboratory-developed RT-PCR test on 55 SARS-CoV-2-positive clinical samples was 100%. Among the 55 positive cases of COVID-19 analysed, no coinfection was detected. The BD MAX rapid multiplex PCR provides a highly sensitive, robust, and accurate assay for the rapid detection of SARS-CoV-2, influenza A/B, and RSV. Taylor & Francis 2021-01-19 /pmc/articles/PMC7832498/ /pubmed/33410371 http://dx.doi.org/10.1080/22221751.2021.1873073 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group, on behalf of Shanghai Shangyixun Cultural Communication Co., Ltd https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Coronaviruses
Chung, Hsing-Yi
Jian, Ming-Jr
Chang, Chih-Kai
Lin, Jung-Chung
Yeh, Kuo-Ming
Chen, Chien-Wen
Chiu, Sheng-Kang
Wang, Yi-Hui
Liao, Shu-Jung
Li, Shih-Yi
Hsieh, Shan-Shan
Tsai, Shih-Hung
Perng, Cherng-Lih
Yang, Ji-Rong
Liu, Ming-Tsan
Chang, Feng-Yee
Shang, Hung-Sheng
Novel dual multiplex real-time RT-PCR assays for the rapid detection of SARS-CoV-2, influenza A/B, and respiratory syncytial virus using the BD MAX open system
title Novel dual multiplex real-time RT-PCR assays for the rapid detection of SARS-CoV-2, influenza A/B, and respiratory syncytial virus using the BD MAX open system
title_full Novel dual multiplex real-time RT-PCR assays for the rapid detection of SARS-CoV-2, influenza A/B, and respiratory syncytial virus using the BD MAX open system
title_fullStr Novel dual multiplex real-time RT-PCR assays for the rapid detection of SARS-CoV-2, influenza A/B, and respiratory syncytial virus using the BD MAX open system
title_full_unstemmed Novel dual multiplex real-time RT-PCR assays for the rapid detection of SARS-CoV-2, influenza A/B, and respiratory syncytial virus using the BD MAX open system
title_short Novel dual multiplex real-time RT-PCR assays for the rapid detection of SARS-CoV-2, influenza A/B, and respiratory syncytial virus using the BD MAX open system
title_sort novel dual multiplex real-time rt-pcr assays for the rapid detection of sars-cov-2, influenza a/b, and respiratory syncytial virus using the bd max open system
topic Coronaviruses
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7832498/
https://www.ncbi.nlm.nih.gov/pubmed/33410371
http://dx.doi.org/10.1080/22221751.2021.1873073
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