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The complete chloroplast genome of Phyllostachys angusta McClure (Poaceae)

Phyllostachys angusta McClure is a precious wood-use bamboo resource, with almost straight stem. The complete chloroplast genome of the P. angusta McClure was assembled for the first time from Illumina pair-end sequencing data in this work. The total genome size of P. angusta McClure was 139,678 bp...

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Detalles Bibliográficos
Autores principales: Yu, Zheng, Linying, Zhao, Tao, Wang, Guofu, Chen, Yifeng, Hong, Jinjun, Yue
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7832504/
https://www.ncbi.nlm.nih.gov/pubmed/33537438
http://dx.doi.org/10.1080/23802359.2020.1860703
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author Yu, Zheng
Linying, Zhao
Tao, Wang
Guofu, Chen
Yifeng, Hong
Jinjun, Yue
author_facet Yu, Zheng
Linying, Zhao
Tao, Wang
Guofu, Chen
Yifeng, Hong
Jinjun, Yue
author_sort Yu, Zheng
collection PubMed
description Phyllostachys angusta McClure is a precious wood-use bamboo resource, with almost straight stem. The complete chloroplast genome of the P. angusta McClure was assembled for the first time from Illumina pair-end sequencing data in this work. The total genome size of P. angusta McClure was 139,678 bp in length, containing a large single-copy (LSC) region of 83,212 bp, a small single-copy (SSC) region of 12,870 bp, and a pair of inverted repeat (IR) regions of 21,798 bp. The overall GC content of the genome was 38.89%, and the corresponding values of the LSC, SSC, and IR regions were 36.97, 33.17, and 44.22%, respectively. A total of 131 genes were annotated, including 85 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. Phylogenetic analysis results strongly supported that P. angusta McClure was closely related to P. reticulate.
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spelling pubmed-78325042021-02-02 The complete chloroplast genome of Phyllostachys angusta McClure (Poaceae) Yu, Zheng Linying, Zhao Tao, Wang Guofu, Chen Yifeng, Hong Jinjun, Yue Mitochondrial DNA B Resour Rapid Communication Phyllostachys angusta McClure is a precious wood-use bamboo resource, with almost straight stem. The complete chloroplast genome of the P. angusta McClure was assembled for the first time from Illumina pair-end sequencing data in this work. The total genome size of P. angusta McClure was 139,678 bp in length, containing a large single-copy (LSC) region of 83,212 bp, a small single-copy (SSC) region of 12,870 bp, and a pair of inverted repeat (IR) regions of 21,798 bp. The overall GC content of the genome was 38.89%, and the corresponding values of the LSC, SSC, and IR regions were 36.97, 33.17, and 44.22%, respectively. A total of 131 genes were annotated, including 85 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. Phylogenetic analysis results strongly supported that P. angusta McClure was closely related to P. reticulate. Taylor & Francis 2021-01-16 /pmc/articles/PMC7832504/ /pubmed/33537438 http://dx.doi.org/10.1080/23802359.2020.1860703 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Rapid Communication
Yu, Zheng
Linying, Zhao
Tao, Wang
Guofu, Chen
Yifeng, Hong
Jinjun, Yue
The complete chloroplast genome of Phyllostachys angusta McClure (Poaceae)
title The complete chloroplast genome of Phyllostachys angusta McClure (Poaceae)
title_full The complete chloroplast genome of Phyllostachys angusta McClure (Poaceae)
title_fullStr The complete chloroplast genome of Phyllostachys angusta McClure (Poaceae)
title_full_unstemmed The complete chloroplast genome of Phyllostachys angusta McClure (Poaceae)
title_short The complete chloroplast genome of Phyllostachys angusta McClure (Poaceae)
title_sort complete chloroplast genome of phyllostachys angusta mcclure (poaceae)
topic Rapid Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7832504/
https://www.ncbi.nlm.nih.gov/pubmed/33537438
http://dx.doi.org/10.1080/23802359.2020.1860703
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