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The complete chloroplast genome of Phyllostachys angusta McClure (Poaceae)
Phyllostachys angusta McClure is a precious wood-use bamboo resource, with almost straight stem. The complete chloroplast genome of the P. angusta McClure was assembled for the first time from Illumina pair-end sequencing data in this work. The total genome size of P. angusta McClure was 139,678 bp...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7832504/ https://www.ncbi.nlm.nih.gov/pubmed/33537438 http://dx.doi.org/10.1080/23802359.2020.1860703 |
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author | Yu, Zheng Linying, Zhao Tao, Wang Guofu, Chen Yifeng, Hong Jinjun, Yue |
author_facet | Yu, Zheng Linying, Zhao Tao, Wang Guofu, Chen Yifeng, Hong Jinjun, Yue |
author_sort | Yu, Zheng |
collection | PubMed |
description | Phyllostachys angusta McClure is a precious wood-use bamboo resource, with almost straight stem. The complete chloroplast genome of the P. angusta McClure was assembled for the first time from Illumina pair-end sequencing data in this work. The total genome size of P. angusta McClure was 139,678 bp in length, containing a large single-copy (LSC) region of 83,212 bp, a small single-copy (SSC) region of 12,870 bp, and a pair of inverted repeat (IR) regions of 21,798 bp. The overall GC content of the genome was 38.89%, and the corresponding values of the LSC, SSC, and IR regions were 36.97, 33.17, and 44.22%, respectively. A total of 131 genes were annotated, including 85 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. Phylogenetic analysis results strongly supported that P. angusta McClure was closely related to P. reticulate. |
format | Online Article Text |
id | pubmed-7832504 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78325042021-02-02 The complete chloroplast genome of Phyllostachys angusta McClure (Poaceae) Yu, Zheng Linying, Zhao Tao, Wang Guofu, Chen Yifeng, Hong Jinjun, Yue Mitochondrial DNA B Resour Rapid Communication Phyllostachys angusta McClure is a precious wood-use bamboo resource, with almost straight stem. The complete chloroplast genome of the P. angusta McClure was assembled for the first time from Illumina pair-end sequencing data in this work. The total genome size of P. angusta McClure was 139,678 bp in length, containing a large single-copy (LSC) region of 83,212 bp, a small single-copy (SSC) region of 12,870 bp, and a pair of inverted repeat (IR) regions of 21,798 bp. The overall GC content of the genome was 38.89%, and the corresponding values of the LSC, SSC, and IR regions were 36.97, 33.17, and 44.22%, respectively. A total of 131 genes were annotated, including 85 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. Phylogenetic analysis results strongly supported that P. angusta McClure was closely related to P. reticulate. Taylor & Francis 2021-01-16 /pmc/articles/PMC7832504/ /pubmed/33537438 http://dx.doi.org/10.1080/23802359.2020.1860703 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Rapid Communication Yu, Zheng Linying, Zhao Tao, Wang Guofu, Chen Yifeng, Hong Jinjun, Yue The complete chloroplast genome of Phyllostachys angusta McClure (Poaceae) |
title | The complete chloroplast genome of Phyllostachys angusta McClure (Poaceae) |
title_full | The complete chloroplast genome of Phyllostachys angusta McClure (Poaceae) |
title_fullStr | The complete chloroplast genome of Phyllostachys angusta McClure (Poaceae) |
title_full_unstemmed | The complete chloroplast genome of Phyllostachys angusta McClure (Poaceae) |
title_short | The complete chloroplast genome of Phyllostachys angusta McClure (Poaceae) |
title_sort | complete chloroplast genome of phyllostachys angusta mcclure (poaceae) |
topic | Rapid Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7832504/ https://www.ncbi.nlm.nih.gov/pubmed/33537438 http://dx.doi.org/10.1080/23802359.2020.1860703 |
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