The complete chloroplast genome of Rhododendron platypodum (Ericaceae): an endemic and endangered species from China

Rhododendron platypodum Diels (Ericaceae) is a Chinese endemic and endangered species with high ornamental value. Here the complete chloroplast (cp) genome of R. platypodum was assembled and characterized. The cp genome is in a total length of 201,047 bp with the typical quadripartite structure of a...

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Autores principales: Ma, Li-Hui, Zhu, Hao-Xiang, Wang, Chao-Ying, Li, Ming-Yang, Wang, Hai-Yang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7832514/
https://www.ncbi.nlm.nih.gov/pubmed/33537441
http://dx.doi.org/10.1080/23802359.2020.1860714
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author Ma, Li-Hui
Zhu, Hao-Xiang
Wang, Chao-Ying
Li, Ming-Yang
Wang, Hai-Yang
author_facet Ma, Li-Hui
Zhu, Hao-Xiang
Wang, Chao-Ying
Li, Ming-Yang
Wang, Hai-Yang
author_sort Ma, Li-Hui
collection PubMed
description Rhododendron platypodum Diels (Ericaceae) is a Chinese endemic and endangered species with high ornamental value. Here the complete chloroplast (cp) genome of R. platypodum was assembled and characterized. The cp genome is in a total length of 201,047 bp with the typical quadripartite structure of angiosperms, containing two inverted repeats (IRs) of 44,650 bp separated by a large single-copy (LSC) region of 109,134 bp and a small single-copy (SSC) region of 2613 bp. The whole cp genome of R. platypodum contains 143 genes, including 93 protein-coding genes, 42 transfer RNA genes and 8 ribosomal RNA genes. Phylogenetic analysis based on the coding sequences of cp genome within the Ericaceae family suggests that R. platypodum is closely related to R. delavayi.
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spelling pubmed-78325142021-02-02 The complete chloroplast genome of Rhododendron platypodum (Ericaceae): an endemic and endangered species from China Ma, Li-Hui Zhu, Hao-Xiang Wang, Chao-Ying Li, Ming-Yang Wang, Hai-Yang Mitochondrial DNA B Resour Mitogenome Announcement Rhododendron platypodum Diels (Ericaceae) is a Chinese endemic and endangered species with high ornamental value. Here the complete chloroplast (cp) genome of R. platypodum was assembled and characterized. The cp genome is in a total length of 201,047 bp with the typical quadripartite structure of angiosperms, containing two inverted repeats (IRs) of 44,650 bp separated by a large single-copy (LSC) region of 109,134 bp and a small single-copy (SSC) region of 2613 bp. The whole cp genome of R. platypodum contains 143 genes, including 93 protein-coding genes, 42 transfer RNA genes and 8 ribosomal RNA genes. Phylogenetic analysis based on the coding sequences of cp genome within the Ericaceae family suggests that R. platypodum is closely related to R. delavayi. Taylor & Francis 2021-01-19 /pmc/articles/PMC7832514/ /pubmed/33537441 http://dx.doi.org/10.1080/23802359.2020.1860714 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Ma, Li-Hui
Zhu, Hao-Xiang
Wang, Chao-Ying
Li, Ming-Yang
Wang, Hai-Yang
The complete chloroplast genome of Rhododendron platypodum (Ericaceae): an endemic and endangered species from China
title The complete chloroplast genome of Rhododendron platypodum (Ericaceae): an endemic and endangered species from China
title_full The complete chloroplast genome of Rhododendron platypodum (Ericaceae): an endemic and endangered species from China
title_fullStr The complete chloroplast genome of Rhododendron platypodum (Ericaceae): an endemic and endangered species from China
title_full_unstemmed The complete chloroplast genome of Rhododendron platypodum (Ericaceae): an endemic and endangered species from China
title_short The complete chloroplast genome of Rhododendron platypodum (Ericaceae): an endemic and endangered species from China
title_sort complete chloroplast genome of rhododendron platypodum (ericaceae): an endemic and endangered species from china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7832514/
https://www.ncbi.nlm.nih.gov/pubmed/33537441
http://dx.doi.org/10.1080/23802359.2020.1860714
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