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The complete chloroplast genome sequence of Davidia involucrata

Davidia involucrata Baill. is a kind of tertiary paleotropical plant floristic relic species unique to China. This rare plant is disappearing due to poor adaptability and serious poaching. Davidia involucrata has been listed as a national first-level protected wild plant, a unique genus plant unique...

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Autores principales: Ang, Li, Zhe, Hou
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7832540/
https://www.ncbi.nlm.nih.gov/pubmed/33537432
http://dx.doi.org/10.1080/23802359.2020.1860715
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author Ang, Li
Zhe, Hou
author_facet Ang, Li
Zhe, Hou
author_sort Ang, Li
collection PubMed
description Davidia involucrata Baill. is a kind of tertiary paleotropical plant floristic relic species unique to China. This rare plant is disappearing due to poor adaptability and serious poaching. Davidia involucrata has been listed as a national first-level protected wild plant, a unique genus plant unique to China, a relic plant, and a well-known ornamental plant in the world. It is a national-level protected plant. In this study, the complete chloroplast genome sequence of D. involucrata was characterized from Illumina pair-end sequencing. The chloroplast genome of D. involucrata was 158,118 bp in length, containing a large single-copy (LSC) region of 87,329 bp, a small single-copy (SSC) region of 18,869 bp, and two inverted repeat (IR) regions of 25,960 bp. The overall GC content is 37.80%, while the corresponding values of the LSC, SSC, and IR regions are 36.0%, 31.6%, and 43.1%, respectively. The genome contains 132 complete genes, including 86 protein-coding genes, 38 tRNA genes, and eight rRNA genes. Phylogenetic analysis based on complete chloroplast genomes showed that D. involucrata and Camptotheca acuminate clustered together as sisters to other related species.
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spelling pubmed-78325402021-02-02 The complete chloroplast genome sequence of Davidia involucrata Ang, Li Zhe, Hou Mitochondrial DNA B Resour Mitogenome Announcement Davidia involucrata Baill. is a kind of tertiary paleotropical plant floristic relic species unique to China. This rare plant is disappearing due to poor adaptability and serious poaching. Davidia involucrata has been listed as a national first-level protected wild plant, a unique genus plant unique to China, a relic plant, and a well-known ornamental plant in the world. It is a national-level protected plant. In this study, the complete chloroplast genome sequence of D. involucrata was characterized from Illumina pair-end sequencing. The chloroplast genome of D. involucrata was 158,118 bp in length, containing a large single-copy (LSC) region of 87,329 bp, a small single-copy (SSC) region of 18,869 bp, and two inverted repeat (IR) regions of 25,960 bp. The overall GC content is 37.80%, while the corresponding values of the LSC, SSC, and IR regions are 36.0%, 31.6%, and 43.1%, respectively. The genome contains 132 complete genes, including 86 protein-coding genes, 38 tRNA genes, and eight rRNA genes. Phylogenetic analysis based on complete chloroplast genomes showed that D. involucrata and Camptotheca acuminate clustered together as sisters to other related species. Taylor & Francis 2021-01-19 /pmc/articles/PMC7832540/ /pubmed/33537432 http://dx.doi.org/10.1080/23802359.2020.1860715 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Ang, Li
Zhe, Hou
The complete chloroplast genome sequence of Davidia involucrata
title The complete chloroplast genome sequence of Davidia involucrata
title_full The complete chloroplast genome sequence of Davidia involucrata
title_fullStr The complete chloroplast genome sequence of Davidia involucrata
title_full_unstemmed The complete chloroplast genome sequence of Davidia involucrata
title_short The complete chloroplast genome sequence of Davidia involucrata
title_sort complete chloroplast genome sequence of davidia involucrata
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7832540/
https://www.ncbi.nlm.nih.gov/pubmed/33537432
http://dx.doi.org/10.1080/23802359.2020.1860715
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