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The complete chloroplast genome sequence of Lotus corniculatus L.
Lotus corniculatus L., a member of the Fabaceae family, is considered one of the most agriculturally important forage plants, owing to its anti-bloating properties; its ability to grow in low-fertility, acidic, and high-salinity soils; and high nutritional value. In this study, we obtained the compl...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7832577/ https://www.ncbi.nlm.nih.gov/pubmed/33537439 http://dx.doi.org/10.1080/23802359.2020.1860708 |
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author | Jiang, Wenbo Ma, Lin Yi, Dengxia Pang, Yongzhen |
author_facet | Jiang, Wenbo Ma, Lin Yi, Dengxia Pang, Yongzhen |
author_sort | Jiang, Wenbo |
collection | PubMed |
description | Lotus corniculatus L., a member of the Fabaceae family, is considered one of the most agriculturally important forage plants, owing to its anti-bloating properties; its ability to grow in low-fertility, acidic, and high-salinity soils; and high nutritional value. In this study, we obtained the complete chloroplast genome of L. corniculatus by Illumina sequencing and GetOrganelle assembly pipeline. The whole chloroplast genome of L. corniculatus is 150,700 bp in length, and has a typical circular structure with four parts: a large single-copy region (LSC 82,117 bp), a small single-copy region (SSC 18,275 bp), and a pair of inverted repeat regions (25,154 bp for both IRa and IRb). The overall GC content is 36.03%. The plastome has 109 unique genes, consisting of 78 protein-coding genes, 27 unique tRNA gene, and 4 unique rRNA genes. Based on the protein-coding gene sequences from 17 species, we reconstructed a maximum likelihood (ML) tree. The phylogenetic result shows that L. corniculatus has a closer relationship with Lotus japonicas. |
format | Online Article Text |
id | pubmed-7832577 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78325772021-02-02 The complete chloroplast genome sequence of Lotus corniculatus L. Jiang, Wenbo Ma, Lin Yi, Dengxia Pang, Yongzhen Mitochondrial DNA B Resour Mitogenome Announcement Lotus corniculatus L., a member of the Fabaceae family, is considered one of the most agriculturally important forage plants, owing to its anti-bloating properties; its ability to grow in low-fertility, acidic, and high-salinity soils; and high nutritional value. In this study, we obtained the complete chloroplast genome of L. corniculatus by Illumina sequencing and GetOrganelle assembly pipeline. The whole chloroplast genome of L. corniculatus is 150,700 bp in length, and has a typical circular structure with four parts: a large single-copy region (LSC 82,117 bp), a small single-copy region (SSC 18,275 bp), and a pair of inverted repeat regions (25,154 bp for both IRa and IRb). The overall GC content is 36.03%. The plastome has 109 unique genes, consisting of 78 protein-coding genes, 27 unique tRNA gene, and 4 unique rRNA genes. Based on the protein-coding gene sequences from 17 species, we reconstructed a maximum likelihood (ML) tree. The phylogenetic result shows that L. corniculatus has a closer relationship with Lotus japonicas. Taylor & Francis 2021-01-17 /pmc/articles/PMC7832577/ /pubmed/33537439 http://dx.doi.org/10.1080/23802359.2020.1860708 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Jiang, Wenbo Ma, Lin Yi, Dengxia Pang, Yongzhen The complete chloroplast genome sequence of Lotus corniculatus L. |
title | The complete chloroplast genome sequence of Lotus corniculatus L. |
title_full | The complete chloroplast genome sequence of Lotus corniculatus L. |
title_fullStr | The complete chloroplast genome sequence of Lotus corniculatus L. |
title_full_unstemmed | The complete chloroplast genome sequence of Lotus corniculatus L. |
title_short | The complete chloroplast genome sequence of Lotus corniculatus L. |
title_sort | complete chloroplast genome sequence of lotus corniculatus l. |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7832577/ https://www.ncbi.nlm.nih.gov/pubmed/33537439 http://dx.doi.org/10.1080/23802359.2020.1860708 |
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