The complete chloroplast genome of Lepidium latifolium linnaeus and phylogenetic analysis of brassicaceae

The complete chloroplast genome sequence of Lepidium latifolium Linnaeus was assembled and characterized in the present study. The plastome is 153,989 bp in length, which is comprised of a large single-copy (LSC) region of 83,565 bp, a small single-copy (SSC) region of 17,526 bp, and two inverted re...

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Autores principales: Shang, Shuai, Zhao, Liping, Xu, Tao, Li, Caiyun, Shen, Ruiting
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7832579/
https://www.ncbi.nlm.nih.gov/pubmed/33537434
http://dx.doi.org/10.1080/23802359.2020.1860699
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author Shang, Shuai
Zhao, Liping
Xu, Tao
Li, Caiyun
Shen, Ruiting
author_facet Shang, Shuai
Zhao, Liping
Xu, Tao
Li, Caiyun
Shen, Ruiting
author_sort Shang, Shuai
collection PubMed
description The complete chloroplast genome sequence of Lepidium latifolium Linnaeus was assembled and characterized in the present study. The plastome is 153,989 bp in length, which is comprised of a large single-copy (LSC) region of 83,565 bp, a small single-copy (SSC) region of 17,526 bp, and two inverted repeat (IR) regions of 26,449 bp. The overall GC content of the plastome was 36.5%. The new sequence comprised 125 genes, including 84 protein-coding genes, 8 ribosomal RNA genes, and 33 tRNA genes. Phylogenetic analysis showed that L. latifolium L. was close to Lepidium meyenii and Lepidium virginicum.
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spelling pubmed-78325792021-02-02 The complete chloroplast genome of Lepidium latifolium linnaeus and phylogenetic analysis of brassicaceae Shang, Shuai Zhao, Liping Xu, Tao Li, Caiyun Shen, Ruiting Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome sequence of Lepidium latifolium Linnaeus was assembled and characterized in the present study. The plastome is 153,989 bp in length, which is comprised of a large single-copy (LSC) region of 83,565 bp, a small single-copy (SSC) region of 17,526 bp, and two inverted repeat (IR) regions of 26,449 bp. The overall GC content of the plastome was 36.5%. The new sequence comprised 125 genes, including 84 protein-coding genes, 8 ribosomal RNA genes, and 33 tRNA genes. Phylogenetic analysis showed that L. latifolium L. was close to Lepidium meyenii and Lepidium virginicum. Taylor & Francis 2021-01-16 /pmc/articles/PMC7832579/ /pubmed/33537434 http://dx.doi.org/10.1080/23802359.2020.1860699 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Shang, Shuai
Zhao, Liping
Xu, Tao
Li, Caiyun
Shen, Ruiting
The complete chloroplast genome of Lepidium latifolium linnaeus and phylogenetic analysis of brassicaceae
title The complete chloroplast genome of Lepidium latifolium linnaeus and phylogenetic analysis of brassicaceae
title_full The complete chloroplast genome of Lepidium latifolium linnaeus and phylogenetic analysis of brassicaceae
title_fullStr The complete chloroplast genome of Lepidium latifolium linnaeus and phylogenetic analysis of brassicaceae
title_full_unstemmed The complete chloroplast genome of Lepidium latifolium linnaeus and phylogenetic analysis of brassicaceae
title_short The complete chloroplast genome of Lepidium latifolium linnaeus and phylogenetic analysis of brassicaceae
title_sort complete chloroplast genome of lepidium latifolium linnaeus and phylogenetic analysis of brassicaceae
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7832579/
https://www.ncbi.nlm.nih.gov/pubmed/33537434
http://dx.doi.org/10.1080/23802359.2020.1860699
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