The complete chloroplast genome of Ilex ‘Tall Boy’, Ilex aquifolium × Ilex latifolia (Aquifoliaceae)

Thecomplete chloroplast (cp) genome of Ilex ‘Tall Boy’, an important economic plant with ornamental and ecological values, was sequenced to investigate its phylogenetic relationship. The entire cp genome of ‘Tall Boy’ was 157,527 bp in length with 37.65% overall GC content, including a large single-...

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Autores principales: Zhang, Fan, Zhou, Yanwei, Chen, Hong, Li, Naiwei, Wang, Chuanyong, Lu, Xiaoqing, Li, Yunlong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7832594/
https://www.ncbi.nlm.nih.gov/pubmed/33537451
http://dx.doi.org/10.1080/23802359.2020.1852898
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author Zhang, Fan
Zhou, Yanwei
Chen, Hong
Li, Naiwei
Wang, Chuanyong
Lu, Xiaoqing
Li, Yunlong
author_facet Zhang, Fan
Zhou, Yanwei
Chen, Hong
Li, Naiwei
Wang, Chuanyong
Lu, Xiaoqing
Li, Yunlong
author_sort Zhang, Fan
collection PubMed
description Thecomplete chloroplast (cp) genome of Ilex ‘Tall Boy’, an important economic plant with ornamental and ecological values, was sequenced to investigate its phylogenetic relationship. The entire cp genome of ‘Tall Boy’ was 157,527 bp in length with 37.65% overall GC content, including a large single-copy (LSC) region of 87,044 bp and a small single-copy (SSC) region of 18,429 bp, which were separated by a pair of inverted repeats (IRs) of 52,054 bp. The cp genome contained 135 genes, including 90 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis based on whole cp genome sequences showed that ‘Tall Boy’ is closest to I. latifolia Thunb. species.
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spelling pubmed-78325942021-02-02 The complete chloroplast genome of Ilex ‘Tall Boy’, Ilex aquifolium × Ilex latifolia (Aquifoliaceae) Zhang, Fan Zhou, Yanwei Chen, Hong Li, Naiwei Wang, Chuanyong Lu, Xiaoqing Li, Yunlong Mitochondrial DNA B Resour Mitogenome Announcement Thecomplete chloroplast (cp) genome of Ilex ‘Tall Boy’, an important economic plant with ornamental and ecological values, was sequenced to investigate its phylogenetic relationship. The entire cp genome of ‘Tall Boy’ was 157,527 bp in length with 37.65% overall GC content, including a large single-copy (LSC) region of 87,044 bp and a small single-copy (SSC) region of 18,429 bp, which were separated by a pair of inverted repeats (IRs) of 52,054 bp. The cp genome contained 135 genes, including 90 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis based on whole cp genome sequences showed that ‘Tall Boy’ is closest to I. latifolia Thunb. species. Taylor & Francis 2021-01-19 /pmc/articles/PMC7832594/ /pubmed/33537451 http://dx.doi.org/10.1080/23802359.2020.1852898 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhang, Fan
Zhou, Yanwei
Chen, Hong
Li, Naiwei
Wang, Chuanyong
Lu, Xiaoqing
Li, Yunlong
The complete chloroplast genome of Ilex ‘Tall Boy’, Ilex aquifolium × Ilex latifolia (Aquifoliaceae)
title The complete chloroplast genome of Ilex ‘Tall Boy’, Ilex aquifolium × Ilex latifolia (Aquifoliaceae)
title_full The complete chloroplast genome of Ilex ‘Tall Boy’, Ilex aquifolium × Ilex latifolia (Aquifoliaceae)
title_fullStr The complete chloroplast genome of Ilex ‘Tall Boy’, Ilex aquifolium × Ilex latifolia (Aquifoliaceae)
title_full_unstemmed The complete chloroplast genome of Ilex ‘Tall Boy’, Ilex aquifolium × Ilex latifolia (Aquifoliaceae)
title_short The complete chloroplast genome of Ilex ‘Tall Boy’, Ilex aquifolium × Ilex latifolia (Aquifoliaceae)
title_sort complete chloroplast genome of ilex ‘tall boy’, ilex aquifolium × ilex latifolia (aquifoliaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7832594/
https://www.ncbi.nlm.nih.gov/pubmed/33537451
http://dx.doi.org/10.1080/23802359.2020.1852898
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