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Evaluating the potency of Sulawesi propolis compounds as ACE-2 inhibitors through molecular docking for COVID-19 drug discovery preliminary study

Coronavirus disease (COVID-19) is a global pandemic caused by severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2). Up to date, there has been no specific cure to treat the disease. Indonesia is one of the countries that is still fighting to control virus transmission. Yet, at the same time,...

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Autores principales: Khayrani, Apriliana Cahya, Irdiani, Rafidha, Aditama, Reza, Pratami, Diah Kartika, Lischer, Kenny, Ansari, Mohammad Javed, Chinnathambi, Arunachalam, Alharbi, Sulaiman Ali, Almoallim, Hesham S., Sahlan, Muhamad
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Author(s). Published by Elsevier B.V. on behalf of King Saud University. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7834134/
https://www.ncbi.nlm.nih.gov/pubmed/33519145
http://dx.doi.org/10.1016/j.jksus.2020.101297
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author Khayrani, Apriliana Cahya
Irdiani, Rafidha
Aditama, Reza
Pratami, Diah Kartika
Lischer, Kenny
Ansari, Mohammad Javed
Chinnathambi, Arunachalam
Alharbi, Sulaiman Ali
Almoallim, Hesham S.
Sahlan, Muhamad
author_facet Khayrani, Apriliana Cahya
Irdiani, Rafidha
Aditama, Reza
Pratami, Diah Kartika
Lischer, Kenny
Ansari, Mohammad Javed
Chinnathambi, Arunachalam
Alharbi, Sulaiman Ali
Almoallim, Hesham S.
Sahlan, Muhamad
author_sort Khayrani, Apriliana Cahya
collection PubMed
description Coronavirus disease (COVID-19) is a global pandemic caused by severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2). Up to date, there has been no specific cure to treat the disease. Indonesia is one of the countries that is still fighting to control virus transmission. Yet, at the same time, Indonesia has a rich biodiversity of natural medicinal products that potentially become an alternative cure. Thus, this study examined the potency of a natural medicinal product, Sulawesi propolis compounds produced by Tetragonula sapiens, inhibiting angiotensin-converting activity enzyme-2 (ACE-2), a receptor of SARS-CoV-2 in the human body. In this study, molecular docking was done to analyze the docking scores as the representation of binding affinity and the interaction profiles of propolis compounds toward ACE-2. The results illustrated that by considering the docking score and the presence of interaction with targeted sites, five compounds, namely glyasperin A, broussoflavonol F, sulabiroins A, (2S)-5,7-dihydroxy-4′-methoxy-8-prenylflavanone and isorhamnetin are potential to inhibit the binding of ACE-2 and SARS-CoV-2, with the docking score of −10.8, −9.9, −9.5, −9.3 and −9.2 kcal/mol respectively. The docking scores are considered to be more favorable compared to MLN-4760 as a potent inhibitor.
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spelling pubmed-78341342021-01-26 Evaluating the potency of Sulawesi propolis compounds as ACE-2 inhibitors through molecular docking for COVID-19 drug discovery preliminary study Khayrani, Apriliana Cahya Irdiani, Rafidha Aditama, Reza Pratami, Diah Kartika Lischer, Kenny Ansari, Mohammad Javed Chinnathambi, Arunachalam Alharbi, Sulaiman Ali Almoallim, Hesham S. Sahlan, Muhamad J King Saud Univ Sci Original Article Coronavirus disease (COVID-19) is a global pandemic caused by severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2). Up to date, there has been no specific cure to treat the disease. Indonesia is one of the countries that is still fighting to control virus transmission. Yet, at the same time, Indonesia has a rich biodiversity of natural medicinal products that potentially become an alternative cure. Thus, this study examined the potency of a natural medicinal product, Sulawesi propolis compounds produced by Tetragonula sapiens, inhibiting angiotensin-converting activity enzyme-2 (ACE-2), a receptor of SARS-CoV-2 in the human body. In this study, molecular docking was done to analyze the docking scores as the representation of binding affinity and the interaction profiles of propolis compounds toward ACE-2. The results illustrated that by considering the docking score and the presence of interaction with targeted sites, five compounds, namely glyasperin A, broussoflavonol F, sulabiroins A, (2S)-5,7-dihydroxy-4′-methoxy-8-prenylflavanone and isorhamnetin are potential to inhibit the binding of ACE-2 and SARS-CoV-2, with the docking score of −10.8, −9.9, −9.5, −9.3 and −9.2 kcal/mol respectively. The docking scores are considered to be more favorable compared to MLN-4760 as a potent inhibitor. The Author(s). Published by Elsevier B.V. on behalf of King Saud University. 2021-03 2020-12-30 /pmc/articles/PMC7834134/ /pubmed/33519145 http://dx.doi.org/10.1016/j.jksus.2020.101297 Text en © 2020 The Author(s) Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Original Article
Khayrani, Apriliana Cahya
Irdiani, Rafidha
Aditama, Reza
Pratami, Diah Kartika
Lischer, Kenny
Ansari, Mohammad Javed
Chinnathambi, Arunachalam
Alharbi, Sulaiman Ali
Almoallim, Hesham S.
Sahlan, Muhamad
Evaluating the potency of Sulawesi propolis compounds as ACE-2 inhibitors through molecular docking for COVID-19 drug discovery preliminary study
title Evaluating the potency of Sulawesi propolis compounds as ACE-2 inhibitors through molecular docking for COVID-19 drug discovery preliminary study
title_full Evaluating the potency of Sulawesi propolis compounds as ACE-2 inhibitors through molecular docking for COVID-19 drug discovery preliminary study
title_fullStr Evaluating the potency of Sulawesi propolis compounds as ACE-2 inhibitors through molecular docking for COVID-19 drug discovery preliminary study
title_full_unstemmed Evaluating the potency of Sulawesi propolis compounds as ACE-2 inhibitors through molecular docking for COVID-19 drug discovery preliminary study
title_short Evaluating the potency of Sulawesi propolis compounds as ACE-2 inhibitors through molecular docking for COVID-19 drug discovery preliminary study
title_sort evaluating the potency of sulawesi propolis compounds as ace-2 inhibitors through molecular docking for covid-19 drug discovery preliminary study
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7834134/
https://www.ncbi.nlm.nih.gov/pubmed/33519145
http://dx.doi.org/10.1016/j.jksus.2020.101297
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