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Sample pooling strategies for SARS-CoV-2 detection

The worldwide COVID-19 pandemic outburst has caused a serious public health issue with increasing needs of accurate and rapid diagnostic and screening testing. This situation requires an optimized management of the chemical reagents, the consumables, and the human resources, in order to respond accu...

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Autores principales: Lagopati, Nefeli, Tsioli, Panagiota, Mourkioti, Ioanna, Polyzou, Aikaterini, Papaspyropoulos, Angelos, Zafiropoulos, Alexandros, Evangelou, Konstantinos, Sourvinos, George, Gorgoulis, Vassilis G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier B.V. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7834440/
https://www.ncbi.nlm.nih.gov/pubmed/33316285
http://dx.doi.org/10.1016/j.jviromet.2020.114044
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author Lagopati, Nefeli
Tsioli, Panagiota
Mourkioti, Ioanna
Polyzou, Aikaterini
Papaspyropoulos, Angelos
Zafiropoulos, Alexandros
Evangelou, Konstantinos
Sourvinos, George
Gorgoulis, Vassilis G.
author_facet Lagopati, Nefeli
Tsioli, Panagiota
Mourkioti, Ioanna
Polyzou, Aikaterini
Papaspyropoulos, Angelos
Zafiropoulos, Alexandros
Evangelou, Konstantinos
Sourvinos, George
Gorgoulis, Vassilis G.
author_sort Lagopati, Nefeli
collection PubMed
description The worldwide COVID-19 pandemic outburst has caused a serious public health issue with increasing needs of accurate and rapid diagnostic and screening testing. This situation requires an optimized management of the chemical reagents, the consumables, and the human resources, in order to respond accurately and effectively, controlling the spread of the disease. Testing on pooled samples maximizes the number of tested samples, by minimizing the time and the lab supplies needed. The general conceptualization of the pooling method is based on mixing samples together in a batch. Individual testing is needed only if a specific pool exhibits a positive result. The development of alternative hybrid methods, based on “in house” protocols, utilizing commercially available consumables, in combination with a reliable pooling method would provide a solution, focusing on the better exploitation of the personnel and the lab supplies, allowing for rapid screening of a population in a reasonably short time.
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spelling pubmed-78344402021-01-26 Sample pooling strategies for SARS-CoV-2 detection Lagopati, Nefeli Tsioli, Panagiota Mourkioti, Ioanna Polyzou, Aikaterini Papaspyropoulos, Angelos Zafiropoulos, Alexandros Evangelou, Konstantinos Sourvinos, George Gorgoulis, Vassilis G. J Virol Methods Article The worldwide COVID-19 pandemic outburst has caused a serious public health issue with increasing needs of accurate and rapid diagnostic and screening testing. This situation requires an optimized management of the chemical reagents, the consumables, and the human resources, in order to respond accurately and effectively, controlling the spread of the disease. Testing on pooled samples maximizes the number of tested samples, by minimizing the time and the lab supplies needed. The general conceptualization of the pooling method is based on mixing samples together in a batch. Individual testing is needed only if a specific pool exhibits a positive result. The development of alternative hybrid methods, based on “in house” protocols, utilizing commercially available consumables, in combination with a reliable pooling method would provide a solution, focusing on the better exploitation of the personnel and the lab supplies, allowing for rapid screening of a population in a reasonably short time. Elsevier B.V. 2021-03 2020-12-11 /pmc/articles/PMC7834440/ /pubmed/33316285 http://dx.doi.org/10.1016/j.jviromet.2020.114044 Text en © 2020 Elsevier B.V. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Lagopati, Nefeli
Tsioli, Panagiota
Mourkioti, Ioanna
Polyzou, Aikaterini
Papaspyropoulos, Angelos
Zafiropoulos, Alexandros
Evangelou, Konstantinos
Sourvinos, George
Gorgoulis, Vassilis G.
Sample pooling strategies for SARS-CoV-2 detection
title Sample pooling strategies for SARS-CoV-2 detection
title_full Sample pooling strategies for SARS-CoV-2 detection
title_fullStr Sample pooling strategies for SARS-CoV-2 detection
title_full_unstemmed Sample pooling strategies for SARS-CoV-2 detection
title_short Sample pooling strategies for SARS-CoV-2 detection
title_sort sample pooling strategies for sars-cov-2 detection
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7834440/
https://www.ncbi.nlm.nih.gov/pubmed/33316285
http://dx.doi.org/10.1016/j.jviromet.2020.114044
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