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Clarifying predictions for COVID-19 from testing data: The example of New York State
With the spread of COVID-19 across the world, a large amount of data on reported cases has become available. We are studying here a potential bias induced by the daily number of tests which may be insufficient or vary over time. Indeed, tests are hard to produce at the early stage of the epidemic an...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
KeAi Publishing
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7834578/ https://www.ncbi.nlm.nih.gov/pubmed/33521405 http://dx.doi.org/10.1016/j.idm.2020.12.011 |
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author | Griette, Quentin Magal, Pierre |
author_facet | Griette, Quentin Magal, Pierre |
author_sort | Griette, Quentin |
collection | PubMed |
description | With the spread of COVID-19 across the world, a large amount of data on reported cases has become available. We are studying here a potential bias induced by the daily number of tests which may be insufficient or vary over time. Indeed, tests are hard to produce at the early stage of the epidemic and can therefore be a limiting factor in the detection of cases. Such a limitation may have a strong impact on the reported cases data. Indeed, some cases may be missing from the official count because the number of tests was not sufficient on a given day. In this work, we propose a new differential equation epidemic model which uses the daily number of tests as an input. We obtain a good agreement between the model simulations and the reported cases data coming from the state of New York. We also explore the relationship between the dynamic of the number of tests and the dynamics of the cases. We obtain a good match between the data and the outcome of the model. Finally, by multiplying the number of tests by 2, 5, 10, and 100 we explore the consequences for the number of reported cases. |
format | Online Article Text |
id | pubmed-7834578 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | KeAi Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-78345782021-01-26 Clarifying predictions for COVID-19 from testing data: The example of New York State Griette, Quentin Magal, Pierre Infect Dis Model Special issue on Modelling and Forecasting the 2019 Novel Coronavirus (2019-nCoV) Transmission; Edited by Prof. Carlos Castillo-Chavez, Prof. Gerardo Chowell-Puente, Prof. Ping Yan, Prof. Jianhong Wu With the spread of COVID-19 across the world, a large amount of data on reported cases has become available. We are studying here a potential bias induced by the daily number of tests which may be insufficient or vary over time. Indeed, tests are hard to produce at the early stage of the epidemic and can therefore be a limiting factor in the detection of cases. Such a limitation may have a strong impact on the reported cases data. Indeed, some cases may be missing from the official count because the number of tests was not sufficient on a given day. In this work, we propose a new differential equation epidemic model which uses the daily number of tests as an input. We obtain a good agreement between the model simulations and the reported cases data coming from the state of New York. We also explore the relationship between the dynamic of the number of tests and the dynamics of the cases. We obtain a good match between the data and the outcome of the model. Finally, by multiplying the number of tests by 2, 5, 10, and 100 we explore the consequences for the number of reported cases. KeAi Publishing 2021-01-13 /pmc/articles/PMC7834578/ /pubmed/33521405 http://dx.doi.org/10.1016/j.idm.2020.12.011 Text en © 2021 The Authors. Production and hosting by Elsevier B.V. on behalf of KeAi Communications Co., Ltd. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Special issue on Modelling and Forecasting the 2019 Novel Coronavirus (2019-nCoV) Transmission; Edited by Prof. Carlos Castillo-Chavez, Prof. Gerardo Chowell-Puente, Prof. Ping Yan, Prof. Jianhong Wu Griette, Quentin Magal, Pierre Clarifying predictions for COVID-19 from testing data: The example of New York State |
title | Clarifying predictions for COVID-19 from testing data: The example of New York State |
title_full | Clarifying predictions for COVID-19 from testing data: The example of New York State |
title_fullStr | Clarifying predictions for COVID-19 from testing data: The example of New York State |
title_full_unstemmed | Clarifying predictions for COVID-19 from testing data: The example of New York State |
title_short | Clarifying predictions for COVID-19 from testing data: The example of New York State |
title_sort | clarifying predictions for covid-19 from testing data: the example of new york state |
topic | Special issue on Modelling and Forecasting the 2019 Novel Coronavirus (2019-nCoV) Transmission; Edited by Prof. Carlos Castillo-Chavez, Prof. Gerardo Chowell-Puente, Prof. Ping Yan, Prof. Jianhong Wu |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7834578/ https://www.ncbi.nlm.nih.gov/pubmed/33521405 http://dx.doi.org/10.1016/j.idm.2020.12.011 |
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