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A perspective on early detection systems models for COVID-19 spreading

The ongoing COVID-19 epidemic highlights the need for effective tools capable of predicting the onset of infection outbreaks at their early stages. The tracing of confirmed cases and the prediction of the local dynamics of contagion through early indicators are crucial measures to a successful fight...

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Autores principales: Vianello, Chiara, Strozzi, Fernanda, Mocellin, Paolo, Cimetta, Elisa, Fabiano, Bruno, Manenti, Flavio, Pozzi, Rossella, Maschio, Giuseppe
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7834884/
https://www.ncbi.nlm.nih.gov/pubmed/33342518
http://dx.doi.org/10.1016/j.bbrc.2020.12.010
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author Vianello, Chiara
Strozzi, Fernanda
Mocellin, Paolo
Cimetta, Elisa
Fabiano, Bruno
Manenti, Flavio
Pozzi, Rossella
Maschio, Giuseppe
author_facet Vianello, Chiara
Strozzi, Fernanda
Mocellin, Paolo
Cimetta, Elisa
Fabiano, Bruno
Manenti, Flavio
Pozzi, Rossella
Maschio, Giuseppe
author_sort Vianello, Chiara
collection PubMed
description The ongoing COVID-19 epidemic highlights the need for effective tools capable of predicting the onset of infection outbreaks at their early stages. The tracing of confirmed cases and the prediction of the local dynamics of contagion through early indicators are crucial measures to a successful fight against emerging infectious diseases (EID). The proposed framework is model-free and applies Early Warning Detection Systems (EWDS) techniques to detect changes in the territorial spread of infections in the very early stages of onset. This study uses publicly available raw data on the spread of SARS-CoV-2 mainly sourced from the database of the Italian Civil Protection Department. Two distinct EWDS approaches, the Hub-Jones (H&J) and Strozzi-Zaldivar (S&Z), are adapted and applied to the current SARS-CoV-2 outbreak. They promptly generate warning signals and detect the onset of an epidemic at early surveillance stages even if working on the limited daily available, open-source data. Additionally, EWDS S&Z criterion is theoretically validated on the basis of the epidemiological SIR. Discussed EWDS successfully analyze self-accelerating systems, like the SARS-CoV-2 scenario, to precociously identify an epidemic spread through the calculation of onset parameters. This approach can also facilitate early clustering detection, further supporting common fight strategies against the spread of EIDs. Overall, we are presenting an effective tool based on solid scientific and methodological foundations to be used to complement medical actions to contrast the spread of infections such as COVID-19.
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spelling pubmed-78348842021-01-26 A perspective on early detection systems models for COVID-19 spreading Vianello, Chiara Strozzi, Fernanda Mocellin, Paolo Cimetta, Elisa Fabiano, Bruno Manenti, Flavio Pozzi, Rossella Maschio, Giuseppe Biochem Biophys Res Commun Article The ongoing COVID-19 epidemic highlights the need for effective tools capable of predicting the onset of infection outbreaks at their early stages. The tracing of confirmed cases and the prediction of the local dynamics of contagion through early indicators are crucial measures to a successful fight against emerging infectious diseases (EID). The proposed framework is model-free and applies Early Warning Detection Systems (EWDS) techniques to detect changes in the territorial spread of infections in the very early stages of onset. This study uses publicly available raw data on the spread of SARS-CoV-2 mainly sourced from the database of the Italian Civil Protection Department. Two distinct EWDS approaches, the Hub-Jones (H&J) and Strozzi-Zaldivar (S&Z), are adapted and applied to the current SARS-CoV-2 outbreak. They promptly generate warning signals and detect the onset of an epidemic at early surveillance stages even if working on the limited daily available, open-source data. Additionally, EWDS S&Z criterion is theoretically validated on the basis of the epidemiological SIR. Discussed EWDS successfully analyze self-accelerating systems, like the SARS-CoV-2 scenario, to precociously identify an epidemic spread through the calculation of onset parameters. This approach can also facilitate early clustering detection, further supporting common fight strategies against the spread of EIDs. Overall, we are presenting an effective tool based on solid scientific and methodological foundations to be used to complement medical actions to contrast the spread of infections such as COVID-19. Elsevier Inc. 2021-01-29 2020-12-05 /pmc/articles/PMC7834884/ /pubmed/33342518 http://dx.doi.org/10.1016/j.bbrc.2020.12.010 Text en © 2020 Elsevier Inc. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Vianello, Chiara
Strozzi, Fernanda
Mocellin, Paolo
Cimetta, Elisa
Fabiano, Bruno
Manenti, Flavio
Pozzi, Rossella
Maschio, Giuseppe
A perspective on early detection systems models for COVID-19 spreading
title A perspective on early detection systems models for COVID-19 spreading
title_full A perspective on early detection systems models for COVID-19 spreading
title_fullStr A perspective on early detection systems models for COVID-19 spreading
title_full_unstemmed A perspective on early detection systems models for COVID-19 spreading
title_short A perspective on early detection systems models for COVID-19 spreading
title_sort perspective on early detection systems models for covid-19 spreading
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7834884/
https://www.ncbi.nlm.nih.gov/pubmed/33342518
http://dx.doi.org/10.1016/j.bbrc.2020.12.010
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