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Identification of “regulation of RhoA activity panel” as a prognostic and predictive biomarker for gastric cancer

RhoA is a member of the RHO family GTPases and is associated with essential functions in gastric cancer. In this study, we identified a gastric cancer biomarker, termed the “regulation of RhoA activity panel” (RRAP). Patients with gastric cancer from The Cancer Genome Atlas database were divided int...

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Autores principales: Huang, Wenwen, Zhao, Songhui, Zhang, Cheng, Li, Zhongwu, Ge, Sai, Lian, Baofeng, Feng, Hui, Wang, Kai, Xu, Ruihua, Ji, Jiafu, Gao, Jing, Shi, Weiwei, Shen, Lin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7835016/
https://www.ncbi.nlm.nih.gov/pubmed/33288739
http://dx.doi.org/10.18632/aging.202179
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author Huang, Wenwen
Zhao, Songhui
Zhang, Cheng
Li, Zhongwu
Ge, Sai
Lian, Baofeng
Feng, Hui
Wang, Kai
Xu, Ruihua
Ji, Jiafu
Gao, Jing
Shi, Weiwei
Shen, Lin
author_facet Huang, Wenwen
Zhao, Songhui
Zhang, Cheng
Li, Zhongwu
Ge, Sai
Lian, Baofeng
Feng, Hui
Wang, Kai
Xu, Ruihua
Ji, Jiafu
Gao, Jing
Shi, Weiwei
Shen, Lin
author_sort Huang, Wenwen
collection PubMed
description RhoA is a member of the RHO family GTPases and is associated with essential functions in gastric cancer. In this study, we identified a gastric cancer biomarker, termed the “regulation of RhoA activity panel” (RRAP). Patients with gastric cancer from The Cancer Genome Atlas database were divided into training (N=160) and validation (N=155) cohorts. A cohort of 109 Chinese gastric cancer patients was utilized as an independent validation. Patients with mutated RRAP showed significantly better overall survival than patients with wild type RRAP. We also analyzed the association between RRAP and the migration capacity, immune-related signatures, and the tumor microenvironment. RRAP-mutant tumors had a significantly lower degree of lymph node metastasis and lower activities of migration-related pathways. These tumors also showed significantly increased immune cell infiltration and cytotoxic activity. Furthermore, two independent patient cohorts who received immune checkpoint blockade therapy were assessed for RRAP mutant status. As expected, for both immunotherapy cohorts, higher response rates to immune checkpoint blockade therapy were observed in patients with RRAP-mutant tumors than in patients with wild type RRAP tumors. Overall, this study indicates that the RRAP gene set is a potential biomarker for gastric cancer prognosis and therapeutic selection.
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spelling pubmed-78350162021-02-03 Identification of “regulation of RhoA activity panel” as a prognostic and predictive biomarker for gastric cancer Huang, Wenwen Zhao, Songhui Zhang, Cheng Li, Zhongwu Ge, Sai Lian, Baofeng Feng, Hui Wang, Kai Xu, Ruihua Ji, Jiafu Gao, Jing Shi, Weiwei Shen, Lin Aging (Albany NY) Research Paper RhoA is a member of the RHO family GTPases and is associated with essential functions in gastric cancer. In this study, we identified a gastric cancer biomarker, termed the “regulation of RhoA activity panel” (RRAP). Patients with gastric cancer from The Cancer Genome Atlas database were divided into training (N=160) and validation (N=155) cohorts. A cohort of 109 Chinese gastric cancer patients was utilized as an independent validation. Patients with mutated RRAP showed significantly better overall survival than patients with wild type RRAP. We also analyzed the association between RRAP and the migration capacity, immune-related signatures, and the tumor microenvironment. RRAP-mutant tumors had a significantly lower degree of lymph node metastasis and lower activities of migration-related pathways. These tumors also showed significantly increased immune cell infiltration and cytotoxic activity. Furthermore, two independent patient cohorts who received immune checkpoint blockade therapy were assessed for RRAP mutant status. As expected, for both immunotherapy cohorts, higher response rates to immune checkpoint blockade therapy were observed in patients with RRAP-mutant tumors than in patients with wild type RRAP tumors. Overall, this study indicates that the RRAP gene set is a potential biomarker for gastric cancer prognosis and therapeutic selection. Impact Journals 2020-12-03 /pmc/articles/PMC7835016/ /pubmed/33288739 http://dx.doi.org/10.18632/aging.202179 Text en Copyright: © 2020 Huang et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Huang, Wenwen
Zhao, Songhui
Zhang, Cheng
Li, Zhongwu
Ge, Sai
Lian, Baofeng
Feng, Hui
Wang, Kai
Xu, Ruihua
Ji, Jiafu
Gao, Jing
Shi, Weiwei
Shen, Lin
Identification of “regulation of RhoA activity panel” as a prognostic and predictive biomarker for gastric cancer
title Identification of “regulation of RhoA activity panel” as a prognostic and predictive biomarker for gastric cancer
title_full Identification of “regulation of RhoA activity panel” as a prognostic and predictive biomarker for gastric cancer
title_fullStr Identification of “regulation of RhoA activity panel” as a prognostic and predictive biomarker for gastric cancer
title_full_unstemmed Identification of “regulation of RhoA activity panel” as a prognostic and predictive biomarker for gastric cancer
title_short Identification of “regulation of RhoA activity panel” as a prognostic and predictive biomarker for gastric cancer
title_sort identification of “regulation of rhoa activity panel” as a prognostic and predictive biomarker for gastric cancer
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7835016/
https://www.ncbi.nlm.nih.gov/pubmed/33288739
http://dx.doi.org/10.18632/aging.202179
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