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Satellite DNA in Neotropical Deer Species

The taxonomy and phylogenetics of Neotropical deer have been mostly based on morphological criteria and needs a critical revision on the basis of new molecular and cytogenetic markers. In this study, we used the variation in the sequence, copy number, and chromosome localization of satellite I-IV DN...

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Autores principales: Vozdova, Miluse, Kubickova, Svatava, Martínková, Natália, Galindo, David Javier, Bernegossi, Agda Maria, Cernohorska, Halina, Kadlcikova, Dita, Musilová, Petra, Duarte, Jose Mauricio, Rubes, Jiri
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7835801/
https://www.ncbi.nlm.nih.gov/pubmed/33478071
http://dx.doi.org/10.3390/genes12010123
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author Vozdova, Miluse
Kubickova, Svatava
Martínková, Natália
Galindo, David Javier
Bernegossi, Agda Maria
Cernohorska, Halina
Kadlcikova, Dita
Musilová, Petra
Duarte, Jose Mauricio
Rubes, Jiri
author_facet Vozdova, Miluse
Kubickova, Svatava
Martínková, Natália
Galindo, David Javier
Bernegossi, Agda Maria
Cernohorska, Halina
Kadlcikova, Dita
Musilová, Petra
Duarte, Jose Mauricio
Rubes, Jiri
author_sort Vozdova, Miluse
collection PubMed
description The taxonomy and phylogenetics of Neotropical deer have been mostly based on morphological criteria and needs a critical revision on the basis of new molecular and cytogenetic markers. In this study, we used the variation in the sequence, copy number, and chromosome localization of satellite I-IV DNA to evaluate evolutionary relationships among eight Neotropical deer species. Using FISH with satI-IV probes derived from Mazama gouazoubira, we proved the presence of satellite DNA blocks in peri/centromeric regions of all analyzed deer. Satellite DNA was also detected in the interstitial chromosome regions of species of the genus Mazama with highly reduced chromosome numbers. In contrast to Blastocerus dichotomus, Ozotoceros bezoarticus, and Odocoileus virginianus, Mazama species showed high abundance of satIV DNA by FISH. The phylogenetic analysis of the satellite DNA showed close relationships between O. bezoarticus and B. dichotomus. Furthermore, the Neotropical and Nearctic populations of O. virginianus formed a single clade. However, the satellite DNA phylogeny did not allow resolving the relationships within the genus Mazama. The high abundance of the satellite DNA in centromeres probably contributes to the formation of chromosomal rearrangements, thus leading to a fast and ongoing speciation in this genus, which has not yet been reflected in the satellite DNA sequence diversification.
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spelling pubmed-78358012021-01-27 Satellite DNA in Neotropical Deer Species Vozdova, Miluse Kubickova, Svatava Martínková, Natália Galindo, David Javier Bernegossi, Agda Maria Cernohorska, Halina Kadlcikova, Dita Musilová, Petra Duarte, Jose Mauricio Rubes, Jiri Genes (Basel) Article The taxonomy and phylogenetics of Neotropical deer have been mostly based on morphological criteria and needs a critical revision on the basis of new molecular and cytogenetic markers. In this study, we used the variation in the sequence, copy number, and chromosome localization of satellite I-IV DNA to evaluate evolutionary relationships among eight Neotropical deer species. Using FISH with satI-IV probes derived from Mazama gouazoubira, we proved the presence of satellite DNA blocks in peri/centromeric regions of all analyzed deer. Satellite DNA was also detected in the interstitial chromosome regions of species of the genus Mazama with highly reduced chromosome numbers. In contrast to Blastocerus dichotomus, Ozotoceros bezoarticus, and Odocoileus virginianus, Mazama species showed high abundance of satIV DNA by FISH. The phylogenetic analysis of the satellite DNA showed close relationships between O. bezoarticus and B. dichotomus. Furthermore, the Neotropical and Nearctic populations of O. virginianus formed a single clade. However, the satellite DNA phylogeny did not allow resolving the relationships within the genus Mazama. The high abundance of the satellite DNA in centromeres probably contributes to the formation of chromosomal rearrangements, thus leading to a fast and ongoing speciation in this genus, which has not yet been reflected in the satellite DNA sequence diversification. MDPI 2021-01-19 /pmc/articles/PMC7835801/ /pubmed/33478071 http://dx.doi.org/10.3390/genes12010123 Text en © 2021 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Vozdova, Miluse
Kubickova, Svatava
Martínková, Natália
Galindo, David Javier
Bernegossi, Agda Maria
Cernohorska, Halina
Kadlcikova, Dita
Musilová, Petra
Duarte, Jose Mauricio
Rubes, Jiri
Satellite DNA in Neotropical Deer Species
title Satellite DNA in Neotropical Deer Species
title_full Satellite DNA in Neotropical Deer Species
title_fullStr Satellite DNA in Neotropical Deer Species
title_full_unstemmed Satellite DNA in Neotropical Deer Species
title_short Satellite DNA in Neotropical Deer Species
title_sort satellite dna in neotropical deer species
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7835801/
https://www.ncbi.nlm.nih.gov/pubmed/33478071
http://dx.doi.org/10.3390/genes12010123
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