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Development and validation of multivariable prediction models for adverse COVID-19 outcomes in IBD patients

IMPORTANCE: Risk calculators can facilitate shared medical decision-making(1). Demographics, comorbidities, medication use, geographic region, and other factors may increase the risk for COVID-19-related complications among patients with IBD(2,3). OBJECTIVES: Develop an individualized prognostic ris...

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Autores principales: Sperger, John, Shah, Kushal S., Lu, Minxin, Zhang, Xian, Ungaro, Ryan C., Brenner, Erica J., Agrawal, Manasi, Colombel, Jean-Frederic, Kappelman, Michael D., Kosorok, Michael R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7836127/
https://www.ncbi.nlm.nih.gov/pubmed/33501455
http://dx.doi.org/10.1101/2021.01.15.21249889
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author Sperger, John
Shah, Kushal S.
Lu, Minxin
Zhang, Xian
Ungaro, Ryan C.
Brenner, Erica J.
Agrawal, Manasi
Colombel, Jean-Frederic
Kappelman, Michael D.
Kosorok, Michael R.
author_facet Sperger, John
Shah, Kushal S.
Lu, Minxin
Zhang, Xian
Ungaro, Ryan C.
Brenner, Erica J.
Agrawal, Manasi
Colombel, Jean-Frederic
Kappelman, Michael D.
Kosorok, Michael R.
author_sort Sperger, John
collection PubMed
description IMPORTANCE: Risk calculators can facilitate shared medical decision-making(1). Demographics, comorbidities, medication use, geographic region, and other factors may increase the risk for COVID-19-related complications among patients with IBD(2,3). OBJECTIVES: Develop an individualized prognostic risk prediction tool for predicting the probability of adverse COVID-19 outcomes in patients with IBD. DESIGN, SETTING, AND PARTICIPANTS: This study developed and validated prognostic penalized logistic regression models(4) using reports to Surveillance Epidemiology of Coronavirus Under Research Exclusion for Inflammatory Bowel Disease (SECURE-IBD) from March–October 2020. Model development was done using a training data set (85% of cases reported March 13 – September 15, 2020), and model validation was conducted using a test data set (the remaining 15% of cases plus all cases reported September 16–October 20, 2020. MAIN OUTCOMES AND MEASURES: 1. Hospitalization+: composite outcome of hospitalization, ICU admission, mechanical ventilation, or death. 2. ICU+: composite outcome of ICU admission, mechanical ventilation, or death. 3. Death. We assessed the resulting models’ discrimination using the area under the curve (AUC) of the receiver-operator characteristic (ROC) curves and reported the corresponding 95% confidence intervals (CIs). RESULTS: We included 2709 cases from 59 countries (mean age 41.2 years [s.d. 18], 50.2% male). A total of 633 (24%) were hospitalized, 137 (5%) were admitted to the ICU or intubated, and 69 (3%) died. 2009 patients comprised the training set and 700 the test set. The models demonstrated excellent discrimination, with a test set AUC (95% CI) of 0.79 (0.75, 0.83) for Hospitalization+, 0.88 (0.82, 0.95) for ICU+, and 0.94 (0.89, 0.99) for Death. Age, comorbidities, corticosteroid use, and male gender were associated with higher risk of death, while use of biologic therapies was associated with a lower risk. CONCLUSIONS AND RELEVANCE: Prognostic models can effectively predict who is at higher risk for COVID-19-related adverse outcomes in a population of IBD patients. A free online risk calculator (https://covidibd.org/covid-19-risk-calculator/) is available for healthcare providers to facilitate discussion of risks due to COVID-19 with IBD patients. The tool numerically and visually summarizes the patient’s probabilities of adverse outcomes and associated CIs. Helping physicians identify their highest-risk patients will be important in the coming months as cases rise in the US and worldwide. This tool can also serve as a model for risk stratification in other chronic diseases.
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spelling pubmed-78361272021-01-27 Development and validation of multivariable prediction models for adverse COVID-19 outcomes in IBD patients Sperger, John Shah, Kushal S. Lu, Minxin Zhang, Xian Ungaro, Ryan C. Brenner, Erica J. Agrawal, Manasi Colombel, Jean-Frederic Kappelman, Michael D. Kosorok, Michael R. medRxiv Article IMPORTANCE: Risk calculators can facilitate shared medical decision-making(1). Demographics, comorbidities, medication use, geographic region, and other factors may increase the risk for COVID-19-related complications among patients with IBD(2,3). OBJECTIVES: Develop an individualized prognostic risk prediction tool for predicting the probability of adverse COVID-19 outcomes in patients with IBD. DESIGN, SETTING, AND PARTICIPANTS: This study developed and validated prognostic penalized logistic regression models(4) using reports to Surveillance Epidemiology of Coronavirus Under Research Exclusion for Inflammatory Bowel Disease (SECURE-IBD) from March–October 2020. Model development was done using a training data set (85% of cases reported March 13 – September 15, 2020), and model validation was conducted using a test data set (the remaining 15% of cases plus all cases reported September 16–October 20, 2020. MAIN OUTCOMES AND MEASURES: 1. Hospitalization+: composite outcome of hospitalization, ICU admission, mechanical ventilation, or death. 2. ICU+: composite outcome of ICU admission, mechanical ventilation, or death. 3. Death. We assessed the resulting models’ discrimination using the area under the curve (AUC) of the receiver-operator characteristic (ROC) curves and reported the corresponding 95% confidence intervals (CIs). RESULTS: We included 2709 cases from 59 countries (mean age 41.2 years [s.d. 18], 50.2% male). A total of 633 (24%) were hospitalized, 137 (5%) were admitted to the ICU or intubated, and 69 (3%) died. 2009 patients comprised the training set and 700 the test set. The models demonstrated excellent discrimination, with a test set AUC (95% CI) of 0.79 (0.75, 0.83) for Hospitalization+, 0.88 (0.82, 0.95) for ICU+, and 0.94 (0.89, 0.99) for Death. Age, comorbidities, corticosteroid use, and male gender were associated with higher risk of death, while use of biologic therapies was associated with a lower risk. CONCLUSIONS AND RELEVANCE: Prognostic models can effectively predict who is at higher risk for COVID-19-related adverse outcomes in a population of IBD patients. A free online risk calculator (https://covidibd.org/covid-19-risk-calculator/) is available for healthcare providers to facilitate discussion of risks due to COVID-19 with IBD patients. The tool numerically and visually summarizes the patient’s probabilities of adverse outcomes and associated CIs. Helping physicians identify their highest-risk patients will be important in the coming months as cases rise in the US and worldwide. This tool can also serve as a model for risk stratification in other chronic diseases. Cold Spring Harbor Laboratory 2021-01-20 /pmc/articles/PMC7836127/ /pubmed/33501455 http://dx.doi.org/10.1101/2021.01.15.21249889 Text en https://creativecommons.org/licenses/by-nd/4.0/This work is licensed under a Creative Commons Attribution-NoDerivatives 4.0 International License (https://creativecommons.org/licenses/by-nd/4.0/) , which allows reusers to copy and distribute the material in any medium or format in unadapted form only, and only so long as attribution is given to the creator. The license allows for commercial use.
spellingShingle Article
Sperger, John
Shah, Kushal S.
Lu, Minxin
Zhang, Xian
Ungaro, Ryan C.
Brenner, Erica J.
Agrawal, Manasi
Colombel, Jean-Frederic
Kappelman, Michael D.
Kosorok, Michael R.
Development and validation of multivariable prediction models for adverse COVID-19 outcomes in IBD patients
title Development and validation of multivariable prediction models for adverse COVID-19 outcomes in IBD patients
title_full Development and validation of multivariable prediction models for adverse COVID-19 outcomes in IBD patients
title_fullStr Development and validation of multivariable prediction models for adverse COVID-19 outcomes in IBD patients
title_full_unstemmed Development and validation of multivariable prediction models for adverse COVID-19 outcomes in IBD patients
title_short Development and validation of multivariable prediction models for adverse COVID-19 outcomes in IBD patients
title_sort development and validation of multivariable prediction models for adverse covid-19 outcomes in ibd patients
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7836127/
https://www.ncbi.nlm.nih.gov/pubmed/33501455
http://dx.doi.org/10.1101/2021.01.15.21249889
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