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AI drug discovery screening for COVID-19 reveals zafirlukast as a repurposing candidate()

AIMS: Over the past few years, AI has been considered as potential important area for improving drug development and in the current urgent need to fight the global COVID-19 pandemic new technologies are even more in focus with the hope to speed up this process. The purpose of our study was to identi...

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Autores principales: Delijewski, Marcin, Haneczok, Jacek
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Author(s). Published by Elsevier B.V. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7836294/
https://www.ncbi.nlm.nih.gov/pubmed/33521623
http://dx.doi.org/10.1016/j.medidd.2020.100077
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author Delijewski, Marcin
Haneczok, Jacek
author_facet Delijewski, Marcin
Haneczok, Jacek
author_sort Delijewski, Marcin
collection PubMed
description AIMS: Over the past few years, AI has been considered as potential important area for improving drug development and in the current urgent need to fight the global COVID-19 pandemic new technologies are even more in focus with the hope to speed up this process. The purpose of our study was to identify the best repurposing candidates among FDA-approved drugs, based on their predicted antiviral activity against SARS-CoV-2. MATERIALS AND METHODS: This article describes a drug discovery screening based on a supervised machine learning model, trained on in vitro data encoded in chemical fingerprints, representing particular molecular substructures. Predictive performance of our model has been evaluated using so-called scaffold splits offering a state-of-the-art setup for assessing model's ability to generalize to new chemical spaces, critical for drug repurposing applications. KEY FINDINGS: Our study identified zafirlukast as the best repurposing candidate for COVID-19. SIGNIFICANCE: Zafirlukast could be potent against COVID-19 both due to its predicted antiviral properties and its ability to attenuate the so called cytokine storm. Thus, these two critical mechanisms of action may be combined in one drug as a novel and promising pharmacotherapy in the current pandemic.
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spelling pubmed-78362942021-01-26 AI drug discovery screening for COVID-19 reveals zafirlukast as a repurposing candidate() Delijewski, Marcin Haneczok, Jacek Med Drug Discov Research Paper AIMS: Over the past few years, AI has been considered as potential important area for improving drug development and in the current urgent need to fight the global COVID-19 pandemic new technologies are even more in focus with the hope to speed up this process. The purpose of our study was to identify the best repurposing candidates among FDA-approved drugs, based on their predicted antiviral activity against SARS-CoV-2. MATERIALS AND METHODS: This article describes a drug discovery screening based on a supervised machine learning model, trained on in vitro data encoded in chemical fingerprints, representing particular molecular substructures. Predictive performance of our model has been evaluated using so-called scaffold splits offering a state-of-the-art setup for assessing model's ability to generalize to new chemical spaces, critical for drug repurposing applications. KEY FINDINGS: Our study identified zafirlukast as the best repurposing candidate for COVID-19. SIGNIFICANCE: Zafirlukast could be potent against COVID-19 both due to its predicted antiviral properties and its ability to attenuate the so called cytokine storm. Thus, these two critical mechanisms of action may be combined in one drug as a novel and promising pharmacotherapy in the current pandemic. The Author(s). Published by Elsevier B.V. 2021-03 2020-12-24 /pmc/articles/PMC7836294/ /pubmed/33521623 http://dx.doi.org/10.1016/j.medidd.2020.100077 Text en © 2020 The Author(s) Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Research Paper
Delijewski, Marcin
Haneczok, Jacek
AI drug discovery screening for COVID-19 reveals zafirlukast as a repurposing candidate()
title AI drug discovery screening for COVID-19 reveals zafirlukast as a repurposing candidate()
title_full AI drug discovery screening for COVID-19 reveals zafirlukast as a repurposing candidate()
title_fullStr AI drug discovery screening for COVID-19 reveals zafirlukast as a repurposing candidate()
title_full_unstemmed AI drug discovery screening for COVID-19 reveals zafirlukast as a repurposing candidate()
title_short AI drug discovery screening for COVID-19 reveals zafirlukast as a repurposing candidate()
title_sort ai drug discovery screening for covid-19 reveals zafirlukast as a repurposing candidate()
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7836294/
https://www.ncbi.nlm.nih.gov/pubmed/33521623
http://dx.doi.org/10.1016/j.medidd.2020.100077
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