Cargando…
A network pharmacology perspective for deciphering potential mechanisms of action of Solanum nigrum L. in bladder cancer
BACKGROUND: Solanum nigrum L. decoction has been used as a folklore medicine in China to prevent the postoperative recurrence of bladder cancer (BC). However, there are no previous pharmacological studies on the protective mechanisms of this activity of the plant. Thus, this study aimed to perform a...
Autores principales: | , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7836472/ https://www.ncbi.nlm.nih.gov/pubmed/33494738 http://dx.doi.org/10.1186/s12906-021-03215-3 |
_version_ | 1783642756786159616 |
---|---|
author | Dong, Yang Hao, Lin Fang, Kun Han, Xiao-xiao Yu, Hui Zhang, Jian-jun Cai, Long-jun Fan, Tao Zhang, Wen-da Pang, Kun Ma, Wei-ming Wang, Xi-tao Han, Cong-hui |
author_facet | Dong, Yang Hao, Lin Fang, Kun Han, Xiao-xiao Yu, Hui Zhang, Jian-jun Cai, Long-jun Fan, Tao Zhang, Wen-da Pang, Kun Ma, Wei-ming Wang, Xi-tao Han, Cong-hui |
author_sort | Dong, Yang |
collection | PubMed |
description | BACKGROUND: Solanum nigrum L. decoction has been used as a folklore medicine in China to prevent the postoperative recurrence of bladder cancer (BC). However, there are no previous pharmacological studies on the protective mechanisms of this activity of the plant. Thus, this study aimed to perform a systematic analysis and to predict the potential action mechanisms underlying S. nigrum activity in BC based on network pharmacology. METHODS: Based on network pharmacology, the active ingredients of S. nigrum and the corresponding targets were identified using the Traditional Chinese Medicines for Systems Pharmacology Database and Analysis Platform database, and BC-related genes were screened using GeneCards and the Online Mendelian Inheritance in Man database. In addition, ingredient-target (I–T) and protein–protein interaction (PPI) networks were constructed using STRING and Cytoscape, Gene Ontology (GO) terms and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were conducted, and then the pathways directly related to BC were integrated manually to reveal the pharmacological mechanism underlying S. nigrum-medicated therapeutic effects in BC. RESULTS: Seven active herbal ingredients from 39 components of S. nigrum were identified, which shared 77 common target genes related to BC. I-T network analysis revealed that quercetin was associated with all targets and that NCOA2 was targeted by four ingredients. Besides, interleukin 6 had the highest degree value in the PPI network, indicating a hub role. A subsequent gene enrichment analysis yielded 86 significant GO terms and 89 significant pathways, implying that S. nigrum had therapeutic benefits in BC through multi-pathway effects, including the HIF-1, TNF, P53, MAPK, PI3K/Akt, apoptosis and bladder cancer pathway. CONCLUSIONS: S. nigrum may mediate pharmacological effects in BC through multi-target and various signaling pathways. Further validation is required experimentally. Network pharmacology approach provides a predicative novel strategy to reveal the holistic mechanism of action of herbs. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12906-021-03215-3. |
format | Online Article Text |
id | pubmed-7836472 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-78364722021-01-26 A network pharmacology perspective for deciphering potential mechanisms of action of Solanum nigrum L. in bladder cancer Dong, Yang Hao, Lin Fang, Kun Han, Xiao-xiao Yu, Hui Zhang, Jian-jun Cai, Long-jun Fan, Tao Zhang, Wen-da Pang, Kun Ma, Wei-ming Wang, Xi-tao Han, Cong-hui BMC Complement Med Ther Research Article BACKGROUND: Solanum nigrum L. decoction has been used as a folklore medicine in China to prevent the postoperative recurrence of bladder cancer (BC). However, there are no previous pharmacological studies on the protective mechanisms of this activity of the plant. Thus, this study aimed to perform a systematic analysis and to predict the potential action mechanisms underlying S. nigrum activity in BC based on network pharmacology. METHODS: Based on network pharmacology, the active ingredients of S. nigrum and the corresponding targets were identified using the Traditional Chinese Medicines for Systems Pharmacology Database and Analysis Platform database, and BC-related genes were screened using GeneCards and the Online Mendelian Inheritance in Man database. In addition, ingredient-target (I–T) and protein–protein interaction (PPI) networks were constructed using STRING and Cytoscape, Gene Ontology (GO) terms and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were conducted, and then the pathways directly related to BC were integrated manually to reveal the pharmacological mechanism underlying S. nigrum-medicated therapeutic effects in BC. RESULTS: Seven active herbal ingredients from 39 components of S. nigrum were identified, which shared 77 common target genes related to BC. I-T network analysis revealed that quercetin was associated with all targets and that NCOA2 was targeted by four ingredients. Besides, interleukin 6 had the highest degree value in the PPI network, indicating a hub role. A subsequent gene enrichment analysis yielded 86 significant GO terms and 89 significant pathways, implying that S. nigrum had therapeutic benefits in BC through multi-pathway effects, including the HIF-1, TNF, P53, MAPK, PI3K/Akt, apoptosis and bladder cancer pathway. CONCLUSIONS: S. nigrum may mediate pharmacological effects in BC through multi-target and various signaling pathways. Further validation is required experimentally. Network pharmacology approach provides a predicative novel strategy to reveal the holistic mechanism of action of herbs. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12906-021-03215-3. BioMed Central 2021-01-25 /pmc/articles/PMC7836472/ /pubmed/33494738 http://dx.doi.org/10.1186/s12906-021-03215-3 Text en © The Author(s) 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Article Dong, Yang Hao, Lin Fang, Kun Han, Xiao-xiao Yu, Hui Zhang, Jian-jun Cai, Long-jun Fan, Tao Zhang, Wen-da Pang, Kun Ma, Wei-ming Wang, Xi-tao Han, Cong-hui A network pharmacology perspective for deciphering potential mechanisms of action of Solanum nigrum L. in bladder cancer |
title | A network pharmacology perspective for deciphering potential mechanisms of action of Solanum nigrum L. in bladder cancer |
title_full | A network pharmacology perspective for deciphering potential mechanisms of action of Solanum nigrum L. in bladder cancer |
title_fullStr | A network pharmacology perspective for deciphering potential mechanisms of action of Solanum nigrum L. in bladder cancer |
title_full_unstemmed | A network pharmacology perspective for deciphering potential mechanisms of action of Solanum nigrum L. in bladder cancer |
title_short | A network pharmacology perspective for deciphering potential mechanisms of action of Solanum nigrum L. in bladder cancer |
title_sort | network pharmacology perspective for deciphering potential mechanisms of action of solanum nigrum l. in bladder cancer |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7836472/ https://www.ncbi.nlm.nih.gov/pubmed/33494738 http://dx.doi.org/10.1186/s12906-021-03215-3 |
work_keys_str_mv | AT dongyang anetworkpharmacologyperspectivefordecipheringpotentialmechanismsofactionofsolanumnigrumlinbladdercancer AT haolin anetworkpharmacologyperspectivefordecipheringpotentialmechanismsofactionofsolanumnigrumlinbladdercancer AT fangkun anetworkpharmacologyperspectivefordecipheringpotentialmechanismsofactionofsolanumnigrumlinbladdercancer AT hanxiaoxiao anetworkpharmacologyperspectivefordecipheringpotentialmechanismsofactionofsolanumnigrumlinbladdercancer AT yuhui anetworkpharmacologyperspectivefordecipheringpotentialmechanismsofactionofsolanumnigrumlinbladdercancer AT zhangjianjun anetworkpharmacologyperspectivefordecipheringpotentialmechanismsofactionofsolanumnigrumlinbladdercancer AT cailongjun anetworkpharmacologyperspectivefordecipheringpotentialmechanismsofactionofsolanumnigrumlinbladdercancer AT fantao anetworkpharmacologyperspectivefordecipheringpotentialmechanismsofactionofsolanumnigrumlinbladdercancer AT zhangwenda anetworkpharmacologyperspectivefordecipheringpotentialmechanismsofactionofsolanumnigrumlinbladdercancer AT pangkun anetworkpharmacologyperspectivefordecipheringpotentialmechanismsofactionofsolanumnigrumlinbladdercancer AT maweiming anetworkpharmacologyperspectivefordecipheringpotentialmechanismsofactionofsolanumnigrumlinbladdercancer AT wangxitao anetworkpharmacologyperspectivefordecipheringpotentialmechanismsofactionofsolanumnigrumlinbladdercancer AT hanconghui anetworkpharmacologyperspectivefordecipheringpotentialmechanismsofactionofsolanumnigrumlinbladdercancer AT dongyang networkpharmacologyperspectivefordecipheringpotentialmechanismsofactionofsolanumnigrumlinbladdercancer AT haolin networkpharmacologyperspectivefordecipheringpotentialmechanismsofactionofsolanumnigrumlinbladdercancer AT fangkun networkpharmacologyperspectivefordecipheringpotentialmechanismsofactionofsolanumnigrumlinbladdercancer AT hanxiaoxiao networkpharmacologyperspectivefordecipheringpotentialmechanismsofactionofsolanumnigrumlinbladdercancer AT yuhui networkpharmacologyperspectivefordecipheringpotentialmechanismsofactionofsolanumnigrumlinbladdercancer AT zhangjianjun networkpharmacologyperspectivefordecipheringpotentialmechanismsofactionofsolanumnigrumlinbladdercancer AT cailongjun networkpharmacologyperspectivefordecipheringpotentialmechanismsofactionofsolanumnigrumlinbladdercancer AT fantao networkpharmacologyperspectivefordecipheringpotentialmechanismsofactionofsolanumnigrumlinbladdercancer AT zhangwenda networkpharmacologyperspectivefordecipheringpotentialmechanismsofactionofsolanumnigrumlinbladdercancer AT pangkun networkpharmacologyperspectivefordecipheringpotentialmechanismsofactionofsolanumnigrumlinbladdercancer AT maweiming networkpharmacologyperspectivefordecipheringpotentialmechanismsofactionofsolanumnigrumlinbladdercancer AT wangxitao networkpharmacologyperspectivefordecipheringpotentialmechanismsofactionofsolanumnigrumlinbladdercancer AT hanconghui networkpharmacologyperspectivefordecipheringpotentialmechanismsofactionofsolanumnigrumlinbladdercancer |