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A network pharmacology perspective for deciphering potential mechanisms of action of Solanum nigrum L. in bladder cancer

BACKGROUND: Solanum nigrum L. decoction has been used as a folklore medicine in China to prevent the postoperative recurrence of bladder cancer (BC). However, there are no previous pharmacological studies on the protective mechanisms of this activity of the plant. Thus, this study aimed to perform a...

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Autores principales: Dong, Yang, Hao, Lin, Fang, Kun, Han, Xiao-xiao, Yu, Hui, Zhang, Jian-jun, Cai, Long-jun, Fan, Tao, Zhang, Wen-da, Pang, Kun, Ma, Wei-ming, Wang, Xi-tao, Han, Cong-hui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7836472/
https://www.ncbi.nlm.nih.gov/pubmed/33494738
http://dx.doi.org/10.1186/s12906-021-03215-3
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author Dong, Yang
Hao, Lin
Fang, Kun
Han, Xiao-xiao
Yu, Hui
Zhang, Jian-jun
Cai, Long-jun
Fan, Tao
Zhang, Wen-da
Pang, Kun
Ma, Wei-ming
Wang, Xi-tao
Han, Cong-hui
author_facet Dong, Yang
Hao, Lin
Fang, Kun
Han, Xiao-xiao
Yu, Hui
Zhang, Jian-jun
Cai, Long-jun
Fan, Tao
Zhang, Wen-da
Pang, Kun
Ma, Wei-ming
Wang, Xi-tao
Han, Cong-hui
author_sort Dong, Yang
collection PubMed
description BACKGROUND: Solanum nigrum L. decoction has been used as a folklore medicine in China to prevent the postoperative recurrence of bladder cancer (BC). However, there are no previous pharmacological studies on the protective mechanisms of this activity of the plant. Thus, this study aimed to perform a systematic analysis and to predict the potential action mechanisms underlying S. nigrum activity in BC based on network pharmacology. METHODS: Based on network pharmacology, the active ingredients of S. nigrum and the corresponding targets were identified using the Traditional Chinese Medicines for Systems Pharmacology Database and Analysis Platform database, and BC-related genes were screened using GeneCards and the Online Mendelian Inheritance in Man database. In addition, ingredient-target (I–T) and protein–protein interaction (PPI) networks were constructed using STRING and Cytoscape, Gene Ontology (GO) terms and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were conducted, and then the pathways directly related to BC were integrated manually to reveal the pharmacological mechanism underlying S. nigrum-medicated therapeutic effects in BC. RESULTS: Seven active herbal ingredients from 39 components of S. nigrum were identified, which shared 77 common target genes related to BC. I-T network analysis revealed that quercetin was associated with all targets and that NCOA2 was targeted by four ingredients. Besides, interleukin 6 had the highest degree value in the PPI network, indicating a hub role. A subsequent gene enrichment analysis yielded 86 significant GO terms and 89 significant pathways, implying that S. nigrum had therapeutic benefits in BC through multi-pathway effects, including the HIF-1, TNF, P53, MAPK, PI3K/Akt, apoptosis and bladder cancer pathway. CONCLUSIONS: S. nigrum may mediate pharmacological effects in BC through multi-target and various signaling pathways. Further validation is required experimentally. Network pharmacology approach provides a predicative novel strategy to reveal the holistic mechanism of action of herbs. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12906-021-03215-3.
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spelling pubmed-78364722021-01-26 A network pharmacology perspective for deciphering potential mechanisms of action of Solanum nigrum L. in bladder cancer Dong, Yang Hao, Lin Fang, Kun Han, Xiao-xiao Yu, Hui Zhang, Jian-jun Cai, Long-jun Fan, Tao Zhang, Wen-da Pang, Kun Ma, Wei-ming Wang, Xi-tao Han, Cong-hui BMC Complement Med Ther Research Article BACKGROUND: Solanum nigrum L. decoction has been used as a folklore medicine in China to prevent the postoperative recurrence of bladder cancer (BC). However, there are no previous pharmacological studies on the protective mechanisms of this activity of the plant. Thus, this study aimed to perform a systematic analysis and to predict the potential action mechanisms underlying S. nigrum activity in BC based on network pharmacology. METHODS: Based on network pharmacology, the active ingredients of S. nigrum and the corresponding targets were identified using the Traditional Chinese Medicines for Systems Pharmacology Database and Analysis Platform database, and BC-related genes were screened using GeneCards and the Online Mendelian Inheritance in Man database. In addition, ingredient-target (I–T) and protein–protein interaction (PPI) networks were constructed using STRING and Cytoscape, Gene Ontology (GO) terms and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were conducted, and then the pathways directly related to BC were integrated manually to reveal the pharmacological mechanism underlying S. nigrum-medicated therapeutic effects in BC. RESULTS: Seven active herbal ingredients from 39 components of S. nigrum were identified, which shared 77 common target genes related to BC. I-T network analysis revealed that quercetin was associated with all targets and that NCOA2 was targeted by four ingredients. Besides, interleukin 6 had the highest degree value in the PPI network, indicating a hub role. A subsequent gene enrichment analysis yielded 86 significant GO terms and 89 significant pathways, implying that S. nigrum had therapeutic benefits in BC through multi-pathway effects, including the HIF-1, TNF, P53, MAPK, PI3K/Akt, apoptosis and bladder cancer pathway. CONCLUSIONS: S. nigrum may mediate pharmacological effects in BC through multi-target and various signaling pathways. Further validation is required experimentally. Network pharmacology approach provides a predicative novel strategy to reveal the holistic mechanism of action of herbs. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12906-021-03215-3. BioMed Central 2021-01-25 /pmc/articles/PMC7836472/ /pubmed/33494738 http://dx.doi.org/10.1186/s12906-021-03215-3 Text en © The Author(s) 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research Article
Dong, Yang
Hao, Lin
Fang, Kun
Han, Xiao-xiao
Yu, Hui
Zhang, Jian-jun
Cai, Long-jun
Fan, Tao
Zhang, Wen-da
Pang, Kun
Ma, Wei-ming
Wang, Xi-tao
Han, Cong-hui
A network pharmacology perspective for deciphering potential mechanisms of action of Solanum nigrum L. in bladder cancer
title A network pharmacology perspective for deciphering potential mechanisms of action of Solanum nigrum L. in bladder cancer
title_full A network pharmacology perspective for deciphering potential mechanisms of action of Solanum nigrum L. in bladder cancer
title_fullStr A network pharmacology perspective for deciphering potential mechanisms of action of Solanum nigrum L. in bladder cancer
title_full_unstemmed A network pharmacology perspective for deciphering potential mechanisms of action of Solanum nigrum L. in bladder cancer
title_short A network pharmacology perspective for deciphering potential mechanisms of action of Solanum nigrum L. in bladder cancer
title_sort network pharmacology perspective for deciphering potential mechanisms of action of solanum nigrum l. in bladder cancer
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7836472/
https://www.ncbi.nlm.nih.gov/pubmed/33494738
http://dx.doi.org/10.1186/s12906-021-03215-3
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