Cargando…

Field evaluation of the performance of a SARS-CoV-2 antigen rapid diagnostic test in Uganda using nasopharyngeal samples

OBJECTIVES: There is a high demand for SARS-CoV-2 testing to identify COVID-19 cases. Real-time quantitative PCR (qRT-PCR) is the recommended diagnostic test but a number of constraints prevent its widespread implementation, including cost. The aim of this study was to evaluate a low cost and easy t...

Descripción completa

Detalles Bibliográficos
Autores principales: Nalumansi, Aminah, Lutalo, Tom, Kayiwa, John, Watera, Christine, Balinandi, Stephen, Kiconco, Jocelyn, Nakaseegu, Joweria, Olara, Denis, Odwilo, Emmanuel, Serwanga, Jennifer, Kikaire, Bernard, Ssemwanga, Deogratius, Nabadda, Susan, Ssewanyana, Isaac, Atwine, Diane, Mwebesa, Henry, Bosa, Henry Kyobe, Nsereko, Christopher, Cotten, Matthew, Downing, Robert, Lutwama, Julius, Kaleebu, Pontiano
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Published by Elsevier Ltd on behalf of International Society for Infectious Diseases. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7836828/
https://www.ncbi.nlm.nih.gov/pubmed/33130198
http://dx.doi.org/10.1016/j.ijid.2020.10.073
_version_ 1783642829284704256
author Nalumansi, Aminah
Lutalo, Tom
Kayiwa, John
Watera, Christine
Balinandi, Stephen
Kiconco, Jocelyn
Nakaseegu, Joweria
Olara, Denis
Odwilo, Emmanuel
Serwanga, Jennifer
Kikaire, Bernard
Ssemwanga, Deogratius
Nabadda, Susan
Ssewanyana, Isaac
Atwine, Diane
Mwebesa, Henry
Bosa, Henry Kyobe
Nsereko, Christopher
Cotten, Matthew
Downing, Robert
Lutwama, Julius
Kaleebu, Pontiano
author_facet Nalumansi, Aminah
Lutalo, Tom
Kayiwa, John
Watera, Christine
Balinandi, Stephen
Kiconco, Jocelyn
Nakaseegu, Joweria
Olara, Denis
Odwilo, Emmanuel
Serwanga, Jennifer
Kikaire, Bernard
Ssemwanga, Deogratius
Nabadda, Susan
Ssewanyana, Isaac
Atwine, Diane
Mwebesa, Henry
Bosa, Henry Kyobe
Nsereko, Christopher
Cotten, Matthew
Downing, Robert
Lutwama, Julius
Kaleebu, Pontiano
author_sort Nalumansi, Aminah
collection PubMed
description OBJECTIVES: There is a high demand for SARS-CoV-2 testing to identify COVID-19 cases. Real-time quantitative PCR (qRT-PCR) is the recommended diagnostic test but a number of constraints prevent its widespread implementation, including cost. The aim of this study was to evaluate a low cost and easy to use rapid antigen test for diagnosing COVID-19 at the point of care. METHODS: Nasopharyngeal swabs from suspected COVID-19 cases and low-risk volunteers were tested with the STANDARD Q COVID-19 Ag Test and the results were compared with the qRT-PCR results. RESULTS: In total, 262 samples were collected, including 90 qRT-PCR positives. The majority of samples were from males (89%) with a mean age of 34 years and only 13 (14%) of the positives were mildly symptomatic. The sensitivity and specificity of the antigen test were 70.0% (95% confidence interval (CI): 60–79) and 92% (95% CI: 87–96), respectively, and the diagnostic accuracy was 84% (95% CI: 79–88). The antigen test was more likely to be positive for samples with qRT-PCR Ct values ≤29, with a sensitivity of 92%. CONCLUSIONS: The STANDARD Q COVID-19 Ag Test performed less than optimally in this evaluation. However, the test may still have an important role to play early in infection when timely access to molecular testing is not available but the results should be confirmed by qRT-PCR.
format Online
Article
Text
id pubmed-7836828
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Published by Elsevier Ltd on behalf of International Society for Infectious Diseases.
record_format MEDLINE/PubMed
spelling pubmed-78368282021-01-26 Field evaluation of the performance of a SARS-CoV-2 antigen rapid diagnostic test in Uganda using nasopharyngeal samples Nalumansi, Aminah Lutalo, Tom Kayiwa, John Watera, Christine Balinandi, Stephen Kiconco, Jocelyn Nakaseegu, Joweria Olara, Denis Odwilo, Emmanuel Serwanga, Jennifer Kikaire, Bernard Ssemwanga, Deogratius Nabadda, Susan Ssewanyana, Isaac Atwine, Diane Mwebesa, Henry Bosa, Henry Kyobe Nsereko, Christopher Cotten, Matthew Downing, Robert Lutwama, Julius Kaleebu, Pontiano Int J Infect Dis Article OBJECTIVES: There is a high demand for SARS-CoV-2 testing to identify COVID-19 cases. Real-time quantitative PCR (qRT-PCR) is the recommended diagnostic test but a number of constraints prevent its widespread implementation, including cost. The aim of this study was to evaluate a low cost and easy to use rapid antigen test for diagnosing COVID-19 at the point of care. METHODS: Nasopharyngeal swabs from suspected COVID-19 cases and low-risk volunteers were tested with the STANDARD Q COVID-19 Ag Test and the results were compared with the qRT-PCR results. RESULTS: In total, 262 samples were collected, including 90 qRT-PCR positives. The majority of samples were from males (89%) with a mean age of 34 years and only 13 (14%) of the positives were mildly symptomatic. The sensitivity and specificity of the antigen test were 70.0% (95% confidence interval (CI): 60–79) and 92% (95% CI: 87–96), respectively, and the diagnostic accuracy was 84% (95% CI: 79–88). The antigen test was more likely to be positive for samples with qRT-PCR Ct values ≤29, with a sensitivity of 92%. CONCLUSIONS: The STANDARD Q COVID-19 Ag Test performed less than optimally in this evaluation. However, the test may still have an important role to play early in infection when timely access to molecular testing is not available but the results should be confirmed by qRT-PCR. Published by Elsevier Ltd on behalf of International Society for Infectious Diseases. 2021-03 2020-10-30 /pmc/articles/PMC7836828/ /pubmed/33130198 http://dx.doi.org/10.1016/j.ijid.2020.10.073 Text en © 2020 Published by Elsevier Ltd on behalf of International Society for Infectious Diseases. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Nalumansi, Aminah
Lutalo, Tom
Kayiwa, John
Watera, Christine
Balinandi, Stephen
Kiconco, Jocelyn
Nakaseegu, Joweria
Olara, Denis
Odwilo, Emmanuel
Serwanga, Jennifer
Kikaire, Bernard
Ssemwanga, Deogratius
Nabadda, Susan
Ssewanyana, Isaac
Atwine, Diane
Mwebesa, Henry
Bosa, Henry Kyobe
Nsereko, Christopher
Cotten, Matthew
Downing, Robert
Lutwama, Julius
Kaleebu, Pontiano
Field evaluation of the performance of a SARS-CoV-2 antigen rapid diagnostic test in Uganda using nasopharyngeal samples
title Field evaluation of the performance of a SARS-CoV-2 antigen rapid diagnostic test in Uganda using nasopharyngeal samples
title_full Field evaluation of the performance of a SARS-CoV-2 antigen rapid diagnostic test in Uganda using nasopharyngeal samples
title_fullStr Field evaluation of the performance of a SARS-CoV-2 antigen rapid diagnostic test in Uganda using nasopharyngeal samples
title_full_unstemmed Field evaluation of the performance of a SARS-CoV-2 antigen rapid diagnostic test in Uganda using nasopharyngeal samples
title_short Field evaluation of the performance of a SARS-CoV-2 antigen rapid diagnostic test in Uganda using nasopharyngeal samples
title_sort field evaluation of the performance of a sars-cov-2 antigen rapid diagnostic test in uganda using nasopharyngeal samples
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7836828/
https://www.ncbi.nlm.nih.gov/pubmed/33130198
http://dx.doi.org/10.1016/j.ijid.2020.10.073
work_keys_str_mv AT nalumansiaminah fieldevaluationoftheperformanceofasarscov2antigenrapiddiagnostictestinugandausingnasopharyngealsamples
AT lutalotom fieldevaluationoftheperformanceofasarscov2antigenrapiddiagnostictestinugandausingnasopharyngealsamples
AT kayiwajohn fieldevaluationoftheperformanceofasarscov2antigenrapiddiagnostictestinugandausingnasopharyngealsamples
AT waterachristine fieldevaluationoftheperformanceofasarscov2antigenrapiddiagnostictestinugandausingnasopharyngealsamples
AT balinandistephen fieldevaluationoftheperformanceofasarscov2antigenrapiddiagnostictestinugandausingnasopharyngealsamples
AT kiconcojocelyn fieldevaluationoftheperformanceofasarscov2antigenrapiddiagnostictestinugandausingnasopharyngealsamples
AT nakaseegujoweria fieldevaluationoftheperformanceofasarscov2antigenrapiddiagnostictestinugandausingnasopharyngealsamples
AT olaradenis fieldevaluationoftheperformanceofasarscov2antigenrapiddiagnostictestinugandausingnasopharyngealsamples
AT odwiloemmanuel fieldevaluationoftheperformanceofasarscov2antigenrapiddiagnostictestinugandausingnasopharyngealsamples
AT serwangajennifer fieldevaluationoftheperformanceofasarscov2antigenrapiddiagnostictestinugandausingnasopharyngealsamples
AT kikairebernard fieldevaluationoftheperformanceofasarscov2antigenrapiddiagnostictestinugandausingnasopharyngealsamples
AT ssemwangadeogratius fieldevaluationoftheperformanceofasarscov2antigenrapiddiagnostictestinugandausingnasopharyngealsamples
AT nabaddasusan fieldevaluationoftheperformanceofasarscov2antigenrapiddiagnostictestinugandausingnasopharyngealsamples
AT ssewanyanaisaac fieldevaluationoftheperformanceofasarscov2antigenrapiddiagnostictestinugandausingnasopharyngealsamples
AT atwinediane fieldevaluationoftheperformanceofasarscov2antigenrapiddiagnostictestinugandausingnasopharyngealsamples
AT mwebesahenry fieldevaluationoftheperformanceofasarscov2antigenrapiddiagnostictestinugandausingnasopharyngealsamples
AT bosahenrykyobe fieldevaluationoftheperformanceofasarscov2antigenrapiddiagnostictestinugandausingnasopharyngealsamples
AT nserekochristopher fieldevaluationoftheperformanceofasarscov2antigenrapiddiagnostictestinugandausingnasopharyngealsamples
AT cottenmatthew fieldevaluationoftheperformanceofasarscov2antigenrapiddiagnostictestinugandausingnasopharyngealsamples
AT downingrobert fieldevaluationoftheperformanceofasarscov2antigenrapiddiagnostictestinugandausingnasopharyngealsamples
AT lutwamajulius fieldevaluationoftheperformanceofasarscov2antigenrapiddiagnostictestinugandausingnasopharyngealsamples
AT kaleebupontiano fieldevaluationoftheperformanceofasarscov2antigenrapiddiagnostictestinugandausingnasopharyngealsamples