Cargando…
SARSCOVIDB—A New Platform for the Analysis of the Molecular Impact of SARS-CoV-2 Viral Infection
[Image: see text] The COVID-19 pandemic caused by the new coronavirus (SARS-CoV-2) has become a global emergency issue for public health. This threat has led to an acceleration in related research and, consequently, an unprecedented volume of clinical and experimental data that include changes in ge...
Autores principales: | , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2021
|
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7839156/ https://www.ncbi.nlm.nih.gov/pubmed/33553941 http://dx.doi.org/10.1021/acsomega.0c05701 |
_version_ | 1783643337489645568 |
---|---|
author | da Rosa, Rafael Lopes Yang, Tung Sheng Tureta, Emanuela Fernanda de Oliveira, Laura Rascovetzki Saciloto Moraes, Amanda Naiara Silva Tatara, Juliana Miranda Costa, Renata Pereira Borges, Júlia Spier Alves, Camila Innocente Berger, Markus Guimarães, Jorge Almeida Santi, Lucélia Beys-da-Silva, Walter Orlando |
author_facet | da Rosa, Rafael Lopes Yang, Tung Sheng Tureta, Emanuela Fernanda de Oliveira, Laura Rascovetzki Saciloto Moraes, Amanda Naiara Silva Tatara, Juliana Miranda Costa, Renata Pereira Borges, Júlia Spier Alves, Camila Innocente Berger, Markus Guimarães, Jorge Almeida Santi, Lucélia Beys-da-Silva, Walter Orlando |
author_sort | da Rosa, Rafael Lopes |
collection | PubMed |
description | [Image: see text] The COVID-19 pandemic caused by the new coronavirus (SARS-CoV-2) has become a global emergency issue for public health. This threat has led to an acceleration in related research and, consequently, an unprecedented volume of clinical and experimental data that include changes in gene expression resulting from infection. The SARS-CoV-2 infection database (SARSCOVIDB: https://sarscovidb.org/) was created to mitigate the difficulties related to this scenario. The SARSCOVIDB is an online platform that aims to integrate all differential gene expression data, at messenger RNA and protein levels, helping to speed up analysis and research on the molecular impact of COVID-19. The database can be searched from different experimental perspectives and presents all related information from published data, such as viral strains, hosts, methodological approaches (proteomics or transcriptomics), genes/proteins, and samples (clinical or experimental). All information was taken from 24 articles related to analyses of differential gene expression out of 5,554 COVID-19/SARS-CoV-2-related articles published so far. The database features 12,535 genes whose expression has been identified as altered due to SARS-CoV-2 infection. Thus, the SARSCOVIDB is a new resource to support the health workers and the scientific community in understanding the pathogenesis and molecular impact caused by SARS-CoV-2. |
format | Online Article Text |
id | pubmed-7839156 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-78391562021-01-27 SARSCOVIDB—A New Platform for the Analysis of the Molecular Impact of SARS-CoV-2 Viral Infection da Rosa, Rafael Lopes Yang, Tung Sheng Tureta, Emanuela Fernanda de Oliveira, Laura Rascovetzki Saciloto Moraes, Amanda Naiara Silva Tatara, Juliana Miranda Costa, Renata Pereira Borges, Júlia Spier Alves, Camila Innocente Berger, Markus Guimarães, Jorge Almeida Santi, Lucélia Beys-da-Silva, Walter Orlando ACS Omega [Image: see text] The COVID-19 pandemic caused by the new coronavirus (SARS-CoV-2) has become a global emergency issue for public health. This threat has led to an acceleration in related research and, consequently, an unprecedented volume of clinical and experimental data that include changes in gene expression resulting from infection. The SARS-CoV-2 infection database (SARSCOVIDB: https://sarscovidb.org/) was created to mitigate the difficulties related to this scenario. The SARSCOVIDB is an online platform that aims to integrate all differential gene expression data, at messenger RNA and protein levels, helping to speed up analysis and research on the molecular impact of COVID-19. The database can be searched from different experimental perspectives and presents all related information from published data, such as viral strains, hosts, methodological approaches (proteomics or transcriptomics), genes/proteins, and samples (clinical or experimental). All information was taken from 24 articles related to analyses of differential gene expression out of 5,554 COVID-19/SARS-CoV-2-related articles published so far. The database features 12,535 genes whose expression has been identified as altered due to SARS-CoV-2 infection. Thus, the SARSCOVIDB is a new resource to support the health workers and the scientific community in understanding the pathogenesis and molecular impact caused by SARS-CoV-2. American Chemical Society 2021-01-21 /pmc/articles/PMC7839156/ /pubmed/33553941 http://dx.doi.org/10.1021/acsomega.0c05701 Text en © 2021 The Authors. Published by American Chemical Society This is an open access article published under a Creative Commons Non-Commercial No Derivative Works (CC-BY-NC-ND) Attribution License (http://pubs.acs.org/page/policy/authorchoice_ccbyncnd_termsofuse.html) , which permits copying and redistribution of the article, and creation of adaptations, all for non-commercial purposes. |
spellingShingle | da Rosa, Rafael Lopes Yang, Tung Sheng Tureta, Emanuela Fernanda de Oliveira, Laura Rascovetzki Saciloto Moraes, Amanda Naiara Silva Tatara, Juliana Miranda Costa, Renata Pereira Borges, Júlia Spier Alves, Camila Innocente Berger, Markus Guimarães, Jorge Almeida Santi, Lucélia Beys-da-Silva, Walter Orlando SARSCOVIDB—A New Platform for the Analysis of the Molecular Impact of SARS-CoV-2 Viral Infection |
title | SARSCOVIDB—A New Platform for the Analysis
of the Molecular Impact of SARS-CoV-2 Viral Infection |
title_full | SARSCOVIDB—A New Platform for the Analysis
of the Molecular Impact of SARS-CoV-2 Viral Infection |
title_fullStr | SARSCOVIDB—A New Platform for the Analysis
of the Molecular Impact of SARS-CoV-2 Viral Infection |
title_full_unstemmed | SARSCOVIDB—A New Platform for the Analysis
of the Molecular Impact of SARS-CoV-2 Viral Infection |
title_short | SARSCOVIDB—A New Platform for the Analysis
of the Molecular Impact of SARS-CoV-2 Viral Infection |
title_sort | sarscovidb—a new platform for the analysis
of the molecular impact of sars-cov-2 viral infection |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7839156/ https://www.ncbi.nlm.nih.gov/pubmed/33553941 http://dx.doi.org/10.1021/acsomega.0c05701 |
work_keys_str_mv | AT darosarafaellopes sarscovidbanewplatformfortheanalysisofthemolecularimpactofsarscov2viralinfection AT yangtungsheng sarscovidbanewplatformfortheanalysisofthemolecularimpactofsarscov2viralinfection AT turetaemanuelafernanda sarscovidbanewplatformfortheanalysisofthemolecularimpactofsarscov2viralinfection AT deoliveiralaurarascovetzkisaciloto sarscovidbanewplatformfortheanalysisofthemolecularimpactofsarscov2viralinfection AT moraesamandanaiarasilva sarscovidbanewplatformfortheanalysisofthemolecularimpactofsarscov2viralinfection AT tatarajulianamiranda sarscovidbanewplatformfortheanalysisofthemolecularimpactofsarscov2viralinfection AT costarenatapereira sarscovidbanewplatformfortheanalysisofthemolecularimpactofsarscov2viralinfection AT borgesjuliaspier sarscovidbanewplatformfortheanalysisofthemolecularimpactofsarscov2viralinfection AT alvescamilainnocente sarscovidbanewplatformfortheanalysisofthemolecularimpactofsarscov2viralinfection AT bergermarkus sarscovidbanewplatformfortheanalysisofthemolecularimpactofsarscov2viralinfection AT guimaraesjorgealmeida sarscovidbanewplatformfortheanalysisofthemolecularimpactofsarscov2viralinfection AT santilucelia sarscovidbanewplatformfortheanalysisofthemolecularimpactofsarscov2viralinfection AT beysdasilvawalterorlando sarscovidbanewplatformfortheanalysisofthemolecularimpactofsarscov2viralinfection |