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SARSCOVIDB—A New Platform for the Analysis of the Molecular Impact of SARS-CoV-2 Viral Infection

[Image: see text] The COVID-19 pandemic caused by the new coronavirus (SARS-CoV-2) has become a global emergency issue for public health. This threat has led to an acceleration in related research and, consequently, an unprecedented volume of clinical and experimental data that include changes in ge...

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Autores principales: da Rosa, Rafael Lopes, Yang, Tung Sheng, Tureta, Emanuela Fernanda, de Oliveira, Laura Rascovetzki Saciloto, Moraes, Amanda Naiara Silva, Tatara, Juliana Miranda, Costa, Renata Pereira, Borges, Júlia Spier, Alves, Camila Innocente, Berger, Markus, Guimarães, Jorge Almeida, Santi, Lucélia, Beys-da-Silva, Walter Orlando
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2021
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7839156/
https://www.ncbi.nlm.nih.gov/pubmed/33553941
http://dx.doi.org/10.1021/acsomega.0c05701
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author da Rosa, Rafael Lopes
Yang, Tung Sheng
Tureta, Emanuela Fernanda
de Oliveira, Laura Rascovetzki Saciloto
Moraes, Amanda Naiara Silva
Tatara, Juliana Miranda
Costa, Renata Pereira
Borges, Júlia Spier
Alves, Camila Innocente
Berger, Markus
Guimarães, Jorge Almeida
Santi, Lucélia
Beys-da-Silva, Walter Orlando
author_facet da Rosa, Rafael Lopes
Yang, Tung Sheng
Tureta, Emanuela Fernanda
de Oliveira, Laura Rascovetzki Saciloto
Moraes, Amanda Naiara Silva
Tatara, Juliana Miranda
Costa, Renata Pereira
Borges, Júlia Spier
Alves, Camila Innocente
Berger, Markus
Guimarães, Jorge Almeida
Santi, Lucélia
Beys-da-Silva, Walter Orlando
author_sort da Rosa, Rafael Lopes
collection PubMed
description [Image: see text] The COVID-19 pandemic caused by the new coronavirus (SARS-CoV-2) has become a global emergency issue for public health. This threat has led to an acceleration in related research and, consequently, an unprecedented volume of clinical and experimental data that include changes in gene expression resulting from infection. The SARS-CoV-2 infection database (SARSCOVIDB: https://sarscovidb.org/) was created to mitigate the difficulties related to this scenario. The SARSCOVIDB is an online platform that aims to integrate all differential gene expression data, at messenger RNA and protein levels, helping to speed up analysis and research on the molecular impact of COVID-19. The database can be searched from different experimental perspectives and presents all related information from published data, such as viral strains, hosts, methodological approaches (proteomics or transcriptomics), genes/proteins, and samples (clinical or experimental). All information was taken from 24 articles related to analyses of differential gene expression out of 5,554 COVID-19/SARS-CoV-2-related articles published so far. The database features 12,535 genes whose expression has been identified as altered due to SARS-CoV-2 infection. Thus, the SARSCOVIDB is a new resource to support the health workers and the scientific community in understanding the pathogenesis and molecular impact caused by SARS-CoV-2.
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spelling pubmed-78391562021-01-27 SARSCOVIDB—A New Platform for the Analysis of the Molecular Impact of SARS-CoV-2 Viral Infection da Rosa, Rafael Lopes Yang, Tung Sheng Tureta, Emanuela Fernanda de Oliveira, Laura Rascovetzki Saciloto Moraes, Amanda Naiara Silva Tatara, Juliana Miranda Costa, Renata Pereira Borges, Júlia Spier Alves, Camila Innocente Berger, Markus Guimarães, Jorge Almeida Santi, Lucélia Beys-da-Silva, Walter Orlando ACS Omega [Image: see text] The COVID-19 pandemic caused by the new coronavirus (SARS-CoV-2) has become a global emergency issue for public health. This threat has led to an acceleration in related research and, consequently, an unprecedented volume of clinical and experimental data that include changes in gene expression resulting from infection. The SARS-CoV-2 infection database (SARSCOVIDB: https://sarscovidb.org/) was created to mitigate the difficulties related to this scenario. The SARSCOVIDB is an online platform that aims to integrate all differential gene expression data, at messenger RNA and protein levels, helping to speed up analysis and research on the molecular impact of COVID-19. The database can be searched from different experimental perspectives and presents all related information from published data, such as viral strains, hosts, methodological approaches (proteomics or transcriptomics), genes/proteins, and samples (clinical or experimental). All information was taken from 24 articles related to analyses of differential gene expression out of 5,554 COVID-19/SARS-CoV-2-related articles published so far. The database features 12,535 genes whose expression has been identified as altered due to SARS-CoV-2 infection. Thus, the SARSCOVIDB is a new resource to support the health workers and the scientific community in understanding the pathogenesis and molecular impact caused by SARS-CoV-2. American Chemical Society 2021-01-21 /pmc/articles/PMC7839156/ /pubmed/33553941 http://dx.doi.org/10.1021/acsomega.0c05701 Text en © 2021 The Authors. Published by American Chemical Society This is an open access article published under a Creative Commons Non-Commercial No Derivative Works (CC-BY-NC-ND) Attribution License (http://pubs.acs.org/page/policy/authorchoice_ccbyncnd_termsofuse.html) , which permits copying and redistribution of the article, and creation of adaptations, all for non-commercial purposes.
spellingShingle da Rosa, Rafael Lopes
Yang, Tung Sheng
Tureta, Emanuela Fernanda
de Oliveira, Laura Rascovetzki Saciloto
Moraes, Amanda Naiara Silva
Tatara, Juliana Miranda
Costa, Renata Pereira
Borges, Júlia Spier
Alves, Camila Innocente
Berger, Markus
Guimarães, Jorge Almeida
Santi, Lucélia
Beys-da-Silva, Walter Orlando
SARSCOVIDB—A New Platform for the Analysis of the Molecular Impact of SARS-CoV-2 Viral Infection
title SARSCOVIDB—A New Platform for the Analysis of the Molecular Impact of SARS-CoV-2 Viral Infection
title_full SARSCOVIDB—A New Platform for the Analysis of the Molecular Impact of SARS-CoV-2 Viral Infection
title_fullStr SARSCOVIDB—A New Platform for the Analysis of the Molecular Impact of SARS-CoV-2 Viral Infection
title_full_unstemmed SARSCOVIDB—A New Platform for the Analysis of the Molecular Impact of SARS-CoV-2 Viral Infection
title_short SARSCOVIDB—A New Platform for the Analysis of the Molecular Impact of SARS-CoV-2 Viral Infection
title_sort sarscovidb—a new platform for the analysis of the molecular impact of sars-cov-2 viral infection
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7839156/
https://www.ncbi.nlm.nih.gov/pubmed/33553941
http://dx.doi.org/10.1021/acsomega.0c05701
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