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Genome sequencing and analysis of plant growth-promoting attributes from Leclercia adecarboxylata
Plant growth-promoting bacteria are ecological alternatives for fertilization, mainly for gramineous. Since plant x bacteria interaction is genotype and strain dependent, searching for new strains may contribute to the development of new biofertilizers. We aim to characterize plant growth-promoting...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Sociedade Brasileira de Genética
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7839631/ https://www.ncbi.nlm.nih.gov/pubmed/33503198 http://dx.doi.org/10.1590/1678-4685-GMB-2020-0130 |
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author | Snak, Aline Vendruscolo, Eliane Cristina Gruszka dos Santos, Marise Fonseca Fiorini, Adriana Mesa, Dany |
author_facet | Snak, Aline Vendruscolo, Eliane Cristina Gruszka dos Santos, Marise Fonseca Fiorini, Adriana Mesa, Dany |
author_sort | Snak, Aline |
collection | PubMed |
description | Plant growth-promoting bacteria are ecological alternatives for fertilization, mainly for gramineous. Since plant x bacteria interaction is genotype and strain dependent, searching for new strains may contribute to the development of new biofertilizers. We aim to characterize plant growth-promoting capacity of Leclercia adecarboxylata strain Palotina, formerly isolated by our group in corn. A single isolated colony was taken and its genome was sequenced using Illumina technology. The whole genome was compared to other Leclercia adecarboxylata strains, and their biological and growth-promoting traits, such as P solubilization and auxin production, were tested. Following that, a 4.8 Mb genome of L. adecarboxylata strain Palotina was assembled and the functional annotation was carried out. This paper is the first to report the genes associated with plant growth promotion demonstrating in vitro indole acid production by this strain. These results project the endophyte as a potential biofertilizer for further commercial exploitation. |
format | Online Article Text |
id | pubmed-7839631 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Sociedade Brasileira de Genética |
record_format | MEDLINE/PubMed |
spelling | pubmed-78396312021-02-03 Genome sequencing and analysis of plant growth-promoting attributes from Leclercia adecarboxylata Snak, Aline Vendruscolo, Eliane Cristina Gruszka dos Santos, Marise Fonseca Fiorini, Adriana Mesa, Dany Genet Mol Biol Genetics of Microorganisms Plant growth-promoting bacteria are ecological alternatives for fertilization, mainly for gramineous. Since plant x bacteria interaction is genotype and strain dependent, searching for new strains may contribute to the development of new biofertilizers. We aim to characterize plant growth-promoting capacity of Leclercia adecarboxylata strain Palotina, formerly isolated by our group in corn. A single isolated colony was taken and its genome was sequenced using Illumina technology. The whole genome was compared to other Leclercia adecarboxylata strains, and their biological and growth-promoting traits, such as P solubilization and auxin production, were tested. Following that, a 4.8 Mb genome of L. adecarboxylata strain Palotina was assembled and the functional annotation was carried out. This paper is the first to report the genes associated with plant growth promotion demonstrating in vitro indole acid production by this strain. These results project the endophyte as a potential biofertilizer for further commercial exploitation. Sociedade Brasileira de Genética 2021-01-27 /pmc/articles/PMC7839631/ /pubmed/33503198 http://dx.doi.org/10.1590/1678-4685-GMB-2020-0130 Text en https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License |
spellingShingle | Genetics of Microorganisms Snak, Aline Vendruscolo, Eliane Cristina Gruszka dos Santos, Marise Fonseca Fiorini, Adriana Mesa, Dany Genome sequencing and analysis of plant growth-promoting attributes from Leclercia adecarboxylata |
title | Genome sequencing and analysis of plant growth-promoting attributes
from Leclercia adecarboxylata
|
title_full | Genome sequencing and analysis of plant growth-promoting attributes
from Leclercia adecarboxylata
|
title_fullStr | Genome sequencing and analysis of plant growth-promoting attributes
from Leclercia adecarboxylata
|
title_full_unstemmed | Genome sequencing and analysis of plant growth-promoting attributes
from Leclercia adecarboxylata
|
title_short | Genome sequencing and analysis of plant growth-promoting attributes
from Leclercia adecarboxylata
|
title_sort | genome sequencing and analysis of plant growth-promoting attributes
from leclercia adecarboxylata |
topic | Genetics of Microorganisms |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7839631/ https://www.ncbi.nlm.nih.gov/pubmed/33503198 http://dx.doi.org/10.1590/1678-4685-GMB-2020-0130 |
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