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Genome sequencing and analysis of plant growth-promoting attributes from Leclercia adecarboxylata

Plant growth-promoting bacteria are ecological alternatives for fertilization, mainly for gramineous. Since plant x bacteria interaction is genotype and strain dependent, searching for new strains may contribute to the development of new biofertilizers. We aim to characterize plant growth-promoting...

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Autores principales: Snak, Aline, Vendruscolo, Eliane Cristina Gruszka, dos Santos, Marise Fonseca, Fiorini, Adriana, Mesa, Dany
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Sociedade Brasileira de Genética 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7839631/
https://www.ncbi.nlm.nih.gov/pubmed/33503198
http://dx.doi.org/10.1590/1678-4685-GMB-2020-0130
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author Snak, Aline
Vendruscolo, Eliane Cristina Gruszka
dos Santos, Marise Fonseca
Fiorini, Adriana
Mesa, Dany
author_facet Snak, Aline
Vendruscolo, Eliane Cristina Gruszka
dos Santos, Marise Fonseca
Fiorini, Adriana
Mesa, Dany
author_sort Snak, Aline
collection PubMed
description Plant growth-promoting bacteria are ecological alternatives for fertilization, mainly for gramineous. Since plant x bacteria interaction is genotype and strain dependent, searching for new strains may contribute to the development of new biofertilizers. We aim to characterize plant growth-promoting capacity of Leclercia adecarboxylata strain Palotina, formerly isolated by our group in corn. A single isolated colony was taken and its genome was sequenced using Illumina technology. The whole genome was compared to other Leclercia adecarboxylata strains, and their biological and growth-promoting traits, such as P solubilization and auxin production, were tested. Following that, a 4.8 Mb genome of L. adecarboxylata strain Palotina was assembled and the functional annotation was carried out. This paper is the first to report the genes associated with plant growth promotion demonstrating in vitro indole acid production by this strain. These results project the endophyte as a potential biofertilizer for further commercial exploitation.
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spelling pubmed-78396312021-02-03 Genome sequencing and analysis of plant growth-promoting attributes from Leclercia adecarboxylata Snak, Aline Vendruscolo, Eliane Cristina Gruszka dos Santos, Marise Fonseca Fiorini, Adriana Mesa, Dany Genet Mol Biol Genetics of Microorganisms Plant growth-promoting bacteria are ecological alternatives for fertilization, mainly for gramineous. Since plant x bacteria interaction is genotype and strain dependent, searching for new strains may contribute to the development of new biofertilizers. We aim to characterize plant growth-promoting capacity of Leclercia adecarboxylata strain Palotina, formerly isolated by our group in corn. A single isolated colony was taken and its genome was sequenced using Illumina technology. The whole genome was compared to other Leclercia adecarboxylata strains, and their biological and growth-promoting traits, such as P solubilization and auxin production, were tested. Following that, a 4.8 Mb genome of L. adecarboxylata strain Palotina was assembled and the functional annotation was carried out. This paper is the first to report the genes associated with plant growth promotion demonstrating in vitro indole acid production by this strain. These results project the endophyte as a potential biofertilizer for further commercial exploitation. Sociedade Brasileira de Genética 2021-01-27 /pmc/articles/PMC7839631/ /pubmed/33503198 http://dx.doi.org/10.1590/1678-4685-GMB-2020-0130 Text en https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License
spellingShingle Genetics of Microorganisms
Snak, Aline
Vendruscolo, Eliane Cristina Gruszka
dos Santos, Marise Fonseca
Fiorini, Adriana
Mesa, Dany
Genome sequencing and analysis of plant growth-promoting attributes from Leclercia adecarboxylata
title Genome sequencing and analysis of plant growth-promoting attributes from Leclercia adecarboxylata
title_full Genome sequencing and analysis of plant growth-promoting attributes from Leclercia adecarboxylata
title_fullStr Genome sequencing and analysis of plant growth-promoting attributes from Leclercia adecarboxylata
title_full_unstemmed Genome sequencing and analysis of plant growth-promoting attributes from Leclercia adecarboxylata
title_short Genome sequencing and analysis of plant growth-promoting attributes from Leclercia adecarboxylata
title_sort genome sequencing and analysis of plant growth-promoting attributes from leclercia adecarboxylata
topic Genetics of Microorganisms
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7839631/
https://www.ncbi.nlm.nih.gov/pubmed/33503198
http://dx.doi.org/10.1590/1678-4685-GMB-2020-0130
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