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Binding Revisited—Avidity in Cellular Function and Signaling
When characterizing biomolecular interactions, avidity, is an umbrella term used to describe the accumulated strength of multiple specific and unspecific interactions between two or more interaction partners. In contrast to the affinity, which is often sufficient to describe monovalent interactions...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7841115/ https://www.ncbi.nlm.nih.gov/pubmed/33521057 http://dx.doi.org/10.3389/fmolb.2020.615565 |
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author | Erlendsson, Simon Teilum, Kaare |
author_facet | Erlendsson, Simon Teilum, Kaare |
author_sort | Erlendsson, Simon |
collection | PubMed |
description | When characterizing biomolecular interactions, avidity, is an umbrella term used to describe the accumulated strength of multiple specific and unspecific interactions between two or more interaction partners. In contrast to the affinity, which is often sufficient to describe monovalent interactions in solution and where the binding strength can be accurately determined by considering only the relationship between the microscopic association and dissociation rates, the avidity is a phenomenological macroscopic parameter linked to several microscopic events. Avidity also covers potential effects of reduced dimensionality and/or hindered diffusion observed at or near surfaces e.g., at the cell membrane. Avidity is often used to describe the discrepancy or the “extra on top” when cellular interactions display binding that are several orders of magnitude stronger than those estimated in vitro. Here we review the principles and theoretical frameworks governing avidity in biological systems and the methods for predicting and simulating avidity. While the avidity and effects thereof are well-understood for extracellular biomolecular interactions, we present here examples of, and discuss how, avidity and the underlying kinetics influences intracellular signaling processes. |
format | Online Article Text |
id | pubmed-7841115 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-78411152021-01-29 Binding Revisited—Avidity in Cellular Function and Signaling Erlendsson, Simon Teilum, Kaare Front Mol Biosci Molecular Biosciences When characterizing biomolecular interactions, avidity, is an umbrella term used to describe the accumulated strength of multiple specific and unspecific interactions between two or more interaction partners. In contrast to the affinity, which is often sufficient to describe monovalent interactions in solution and where the binding strength can be accurately determined by considering only the relationship between the microscopic association and dissociation rates, the avidity is a phenomenological macroscopic parameter linked to several microscopic events. Avidity also covers potential effects of reduced dimensionality and/or hindered diffusion observed at or near surfaces e.g., at the cell membrane. Avidity is often used to describe the discrepancy or the “extra on top” when cellular interactions display binding that are several orders of magnitude stronger than those estimated in vitro. Here we review the principles and theoretical frameworks governing avidity in biological systems and the methods for predicting and simulating avidity. While the avidity and effects thereof are well-understood for extracellular biomolecular interactions, we present here examples of, and discuss how, avidity and the underlying kinetics influences intracellular signaling processes. Frontiers Media S.A. 2021-01-14 /pmc/articles/PMC7841115/ /pubmed/33521057 http://dx.doi.org/10.3389/fmolb.2020.615565 Text en Copyright © 2021 Erlendsson and Teilum. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Molecular Biosciences Erlendsson, Simon Teilum, Kaare Binding Revisited—Avidity in Cellular Function and Signaling |
title | Binding Revisited—Avidity in Cellular Function and Signaling |
title_full | Binding Revisited—Avidity in Cellular Function and Signaling |
title_fullStr | Binding Revisited—Avidity in Cellular Function and Signaling |
title_full_unstemmed | Binding Revisited—Avidity in Cellular Function and Signaling |
title_short | Binding Revisited—Avidity in Cellular Function and Signaling |
title_sort | binding revisited—avidity in cellular function and signaling |
topic | Molecular Biosciences |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7841115/ https://www.ncbi.nlm.nih.gov/pubmed/33521057 http://dx.doi.org/10.3389/fmolb.2020.615565 |
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