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Joint optic disc and cup segmentation based on densely connected depthwise separable convolution deep network
BACKGROUND: Glaucoma is an eye disease that causes vision loss and even blindness. The cup to disc ratio (CDR) is an important indicator for glaucoma screening and diagnosis. Accurate segmentation for the optic disc and cup helps obtain CDR. Although many deep learning-based methods have been propos...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7842021/ https://www.ncbi.nlm.nih.gov/pubmed/33509106 http://dx.doi.org/10.1186/s12880-020-00528-6 |
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author | Liu, Bingyan Pan, Daru Song, Hui |
author_facet | Liu, Bingyan Pan, Daru Song, Hui |
author_sort | Liu, Bingyan |
collection | PubMed |
description | BACKGROUND: Glaucoma is an eye disease that causes vision loss and even blindness. The cup to disc ratio (CDR) is an important indicator for glaucoma screening and diagnosis. Accurate segmentation for the optic disc and cup helps obtain CDR. Although many deep learning-based methods have been proposed to segment the disc and cup for fundus image, achieving highly accurate segmentation performance is still a great challenge due to the heavy overlap between the optic disc and cup. METHODS: In this paper, we propose a two-stage method where the optic disc is firstly located and then the optic disc and cup are segmented jointly according to the interesting areas. Also, we consider the joint optic disc and cup segmentation task as a multi-category semantic segmentation task for which a deep learning-based model named DDSC-Net (densely connected depthwise separable convolution network) is proposed. Specifically, we employ depthwise separable convolutional layer and image pyramid input to form a deeper and wider network to improve segmentation performance. Finally, we evaluate our method on two publicly available datasets, Drishti-GS and REFUGE dataset. RESULTS: The experiment results show that the proposed method outperforms state-of-the-art methods, such as pOSAL, GL-Net, M-Net and Stack-U-Net in terms of disc coefficients, with the scores of 0.9780 (optic disc) and 0.9123 (optic cup) on the DRISHTI-GS dataset, and the scores of 0.9601 (optic disc) and 0.8903 (optic cup) on the REFUGE dataset. Particularly, in the more challenging optic cup segmentation task, our method outperforms GL-Net by 0.7[Formula: see text] in terms of disc coefficients on the Drishti-GS dataset and outperforms pOSAL by 0.79[Formula: see text] on the REFUGE dataset, respectively. CONCLUSIONS: The promising segmentation performances reveal that our method has the potential in assisting the screening and diagnosis of glaucoma. |
format | Online Article Text |
id | pubmed-7842021 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-78420212021-01-28 Joint optic disc and cup segmentation based on densely connected depthwise separable convolution deep network Liu, Bingyan Pan, Daru Song, Hui BMC Med Imaging Research Article BACKGROUND: Glaucoma is an eye disease that causes vision loss and even blindness. The cup to disc ratio (CDR) is an important indicator for glaucoma screening and diagnosis. Accurate segmentation for the optic disc and cup helps obtain CDR. Although many deep learning-based methods have been proposed to segment the disc and cup for fundus image, achieving highly accurate segmentation performance is still a great challenge due to the heavy overlap between the optic disc and cup. METHODS: In this paper, we propose a two-stage method where the optic disc is firstly located and then the optic disc and cup are segmented jointly according to the interesting areas. Also, we consider the joint optic disc and cup segmentation task as a multi-category semantic segmentation task for which a deep learning-based model named DDSC-Net (densely connected depthwise separable convolution network) is proposed. Specifically, we employ depthwise separable convolutional layer and image pyramid input to form a deeper and wider network to improve segmentation performance. Finally, we evaluate our method on two publicly available datasets, Drishti-GS and REFUGE dataset. RESULTS: The experiment results show that the proposed method outperforms state-of-the-art methods, such as pOSAL, GL-Net, M-Net and Stack-U-Net in terms of disc coefficients, with the scores of 0.9780 (optic disc) and 0.9123 (optic cup) on the DRISHTI-GS dataset, and the scores of 0.9601 (optic disc) and 0.8903 (optic cup) on the REFUGE dataset. Particularly, in the more challenging optic cup segmentation task, our method outperforms GL-Net by 0.7[Formula: see text] in terms of disc coefficients on the Drishti-GS dataset and outperforms pOSAL by 0.79[Formula: see text] on the REFUGE dataset, respectively. CONCLUSIONS: The promising segmentation performances reveal that our method has the potential in assisting the screening and diagnosis of glaucoma. BioMed Central 2021-01-28 /pmc/articles/PMC7842021/ /pubmed/33509106 http://dx.doi.org/10.1186/s12880-020-00528-6 Text en © The Author(s) 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Article Liu, Bingyan Pan, Daru Song, Hui Joint optic disc and cup segmentation based on densely connected depthwise separable convolution deep network |
title | Joint optic disc and cup segmentation based on densely connected depthwise separable convolution deep network |
title_full | Joint optic disc and cup segmentation based on densely connected depthwise separable convolution deep network |
title_fullStr | Joint optic disc and cup segmentation based on densely connected depthwise separable convolution deep network |
title_full_unstemmed | Joint optic disc and cup segmentation based on densely connected depthwise separable convolution deep network |
title_short | Joint optic disc and cup segmentation based on densely connected depthwise separable convolution deep network |
title_sort | joint optic disc and cup segmentation based on densely connected depthwise separable convolution deep network |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7842021/ https://www.ncbi.nlm.nih.gov/pubmed/33509106 http://dx.doi.org/10.1186/s12880-020-00528-6 |
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