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Fast digital lossy compression for X-ray ptychographic data
Increases in X-ray brightness from synchrotron light sources lead to a requirement for higher frame rates from hybrid pixel array detectors (HPADs), while also favoring charge integration over photon counting. However, transfer of the full uncompressed data will begin to constrain detector design, a...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7842218/ https://www.ncbi.nlm.nih.gov/pubmed/33399580 http://dx.doi.org/10.1107/S1600577520013326 |
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author | Huang, Panpan Du, Ming Hammer, Mike Miceli, Antonino Jacobsen, Chris |
author_facet | Huang, Panpan Du, Ming Hammer, Mike Miceli, Antonino Jacobsen, Chris |
author_sort | Huang, Panpan |
collection | PubMed |
description | Increases in X-ray brightness from synchrotron light sources lead to a requirement for higher frame rates from hybrid pixel array detectors (HPADs), while also favoring charge integration over photon counting. However, transfer of the full uncompressed data will begin to constrain detector design, as well as limit the achievable continuous frame rate. Here a data compression scheme that is easy to implement in a HPAD’s application-specific integrated circuit (ASIC) is described, and how different degrees of compression affect image quality in ptychography, a commonly employed coherent imaging method, is examined. Using adaptive encoding quantization, it is shown in simulations that one can digitize signals up to 16383 photons per pixel (corresponding to 14 bits of information) using only 8 or 9 bits for data transfer, with negligible effect on the reconstructed image. |
format | Online Article Text |
id | pubmed-7842218 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-78422182021-02-05 Fast digital lossy compression for X-ray ptychographic data Huang, Panpan Du, Ming Hammer, Mike Miceli, Antonino Jacobsen, Chris J Synchrotron Radiat Research Papers Increases in X-ray brightness from synchrotron light sources lead to a requirement for higher frame rates from hybrid pixel array detectors (HPADs), while also favoring charge integration over photon counting. However, transfer of the full uncompressed data will begin to constrain detector design, as well as limit the achievable continuous frame rate. Here a data compression scheme that is easy to implement in a HPAD’s application-specific integrated circuit (ASIC) is described, and how different degrees of compression affect image quality in ptychography, a commonly employed coherent imaging method, is examined. Using adaptive encoding quantization, it is shown in simulations that one can digitize signals up to 16383 photons per pixel (corresponding to 14 bits of information) using only 8 or 9 bits for data transfer, with negligible effect on the reconstructed image. International Union of Crystallography 2021-01-01 /pmc/articles/PMC7842218/ /pubmed/33399580 http://dx.doi.org/10.1107/S1600577520013326 Text en © Panpan Huang et al. 2021 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Research Papers Huang, Panpan Du, Ming Hammer, Mike Miceli, Antonino Jacobsen, Chris Fast digital lossy compression for X-ray ptychographic data |
title | Fast digital lossy compression for X-ray ptychographic data |
title_full | Fast digital lossy compression for X-ray ptychographic data |
title_fullStr | Fast digital lossy compression for X-ray ptychographic data |
title_full_unstemmed | Fast digital lossy compression for X-ray ptychographic data |
title_short | Fast digital lossy compression for X-ray ptychographic data |
title_sort | fast digital lossy compression for x-ray ptychographic data |
topic | Research Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7842218/ https://www.ncbi.nlm.nih.gov/pubmed/33399580 http://dx.doi.org/10.1107/S1600577520013326 |
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