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A patient-specific approach for quantitative and automatic analysis of computed tomography images in lung disease: Application to COVID-19 patients
PURPOSE: Quantitative metrics in lung computed tomography (CT) images have been widely used, often without a clear connection with physiology. This work proposes a patient-independent model for the estimation of well-aerated volume of lungs in CT images (WAVE). METHODS: A Gaussian fit, with mean (Mu...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Associazione Italiana di Fisica Medica. Published by Elsevier Ltd.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7843021/ https://www.ncbi.nlm.nih.gov/pubmed/33567361 http://dx.doi.org/10.1016/j.ejmp.2021.01.004 |
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author | Berta, L. De Mattia, C. Rizzetto, F. Carrazza, S. Colombo, P.E. Fumagalli, R. Langer, T. Lizio, D. Vanzulli, A. Torresin, A. |
author_facet | Berta, L. De Mattia, C. Rizzetto, F. Carrazza, S. Colombo, P.E. Fumagalli, R. Langer, T. Lizio, D. Vanzulli, A. Torresin, A. |
author_sort | Berta, L. |
collection | PubMed |
description | PURPOSE: Quantitative metrics in lung computed tomography (CT) images have been widely used, often without a clear connection with physiology. This work proposes a patient-independent model for the estimation of well-aerated volume of lungs in CT images (WAVE). METHODS: A Gaussian fit, with mean (Mu.f) and width (Sigma.f) values, was applied to the lower CT histogram data points of the lung to provide the estimation of the well-aerated lung volume (WAVE.f). Independence from CT reconstruction parameters and respiratory cycle was analysed using healthy lung CT images and 4DCT acquisitions. The Gaussian metrics and first order radiomic features calculated for a third cohort of COVID-19 patients were compared with those relative to healthy lungs. Each lung was further segmented in 24 subregions and a new biomarker derived from Gaussian fit parameter Mu.f was proposed to represent the local density changes. RESULTS: WAVE.f resulted independent from the respiratory motion in 80% of the cases. Differences of 1%, 2% and up to 14% resulted comparing a moderate iterative strength and FBP algorithm, 1 and 3 mm of slice thickness and different reconstruction kernel. Healthy subjects were significantly different from COVID-19 patients for all the metrics calculated. Graphical representation of the local biomarker provides spatial and quantitative information in a single 2D picture. CONCLUSIONS: Unlike other metrics based on fixed histogram thresholds, this model is able to consider the inter- and intra-subject variability. In addition, it defines a local biomarker to quantify the severity of the disease, independently of the observer. |
format | Online Article Text |
id | pubmed-7843021 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Associazione Italiana di Fisica Medica. Published by Elsevier Ltd. |
record_format | MEDLINE/PubMed |
spelling | pubmed-78430212021-01-29 A patient-specific approach for quantitative and automatic analysis of computed tomography images in lung disease: Application to COVID-19 patients Berta, L. De Mattia, C. Rizzetto, F. Carrazza, S. Colombo, P.E. Fumagalli, R. Langer, T. Lizio, D. Vanzulli, A. Torresin, A. Phys Med Original Paper PURPOSE: Quantitative metrics in lung computed tomography (CT) images have been widely used, often without a clear connection with physiology. This work proposes a patient-independent model for the estimation of well-aerated volume of lungs in CT images (WAVE). METHODS: A Gaussian fit, with mean (Mu.f) and width (Sigma.f) values, was applied to the lower CT histogram data points of the lung to provide the estimation of the well-aerated lung volume (WAVE.f). Independence from CT reconstruction parameters and respiratory cycle was analysed using healthy lung CT images and 4DCT acquisitions. The Gaussian metrics and first order radiomic features calculated for a third cohort of COVID-19 patients were compared with those relative to healthy lungs. Each lung was further segmented in 24 subregions and a new biomarker derived from Gaussian fit parameter Mu.f was proposed to represent the local density changes. RESULTS: WAVE.f resulted independent from the respiratory motion in 80% of the cases. Differences of 1%, 2% and up to 14% resulted comparing a moderate iterative strength and FBP algorithm, 1 and 3 mm of slice thickness and different reconstruction kernel. Healthy subjects were significantly different from COVID-19 patients for all the metrics calculated. Graphical representation of the local biomarker provides spatial and quantitative information in a single 2D picture. CONCLUSIONS: Unlike other metrics based on fixed histogram thresholds, this model is able to consider the inter- and intra-subject variability. In addition, it defines a local biomarker to quantify the severity of the disease, independently of the observer. Associazione Italiana di Fisica Medica. Published by Elsevier Ltd. 2021-02 2021-01-28 /pmc/articles/PMC7843021/ /pubmed/33567361 http://dx.doi.org/10.1016/j.ejmp.2021.01.004 Text en © 2021 Associazione Italiana di Fisica Medica. Published by Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active. |
spellingShingle | Original Paper Berta, L. De Mattia, C. Rizzetto, F. Carrazza, S. Colombo, P.E. Fumagalli, R. Langer, T. Lizio, D. Vanzulli, A. Torresin, A. A patient-specific approach for quantitative and automatic analysis of computed tomography images in lung disease: Application to COVID-19 patients |
title | A patient-specific approach for quantitative and automatic analysis of computed tomography images in lung disease: Application to COVID-19 patients |
title_full | A patient-specific approach for quantitative and automatic analysis of computed tomography images in lung disease: Application to COVID-19 patients |
title_fullStr | A patient-specific approach for quantitative and automatic analysis of computed tomography images in lung disease: Application to COVID-19 patients |
title_full_unstemmed | A patient-specific approach for quantitative and automatic analysis of computed tomography images in lung disease: Application to COVID-19 patients |
title_short | A patient-specific approach for quantitative and automatic analysis of computed tomography images in lung disease: Application to COVID-19 patients |
title_sort | patient-specific approach for quantitative and automatic analysis of computed tomography images in lung disease: application to covid-19 patients |
topic | Original Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7843021/ https://www.ncbi.nlm.nih.gov/pubmed/33567361 http://dx.doi.org/10.1016/j.ejmp.2021.01.004 |
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