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Subsampled Directed-Percolation Models Explain Scaling Relations Experimentally Observed in the Brain
Recent experimental results on spike avalanches measured in the urethane-anesthetized rat cortex have revealed scaling relations that indicate a phase transition at a specific level of cortical firing rate variability. The scaling relations point to critical exponents whose values differ from those...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7843423/ https://www.ncbi.nlm.nih.gov/pubmed/33519388 http://dx.doi.org/10.3389/fncir.2020.576727 |
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author | Carvalho, Tawan T. A. Fontenele, Antonio J. Girardi-Schappo, Mauricio Feliciano, Thaís Aguiar, Leandro A. A. Silva, Thais P. L. de Vasconcelos, Nivaldo A. P. Carelli, Pedro V. Copelli, Mauro |
author_facet | Carvalho, Tawan T. A. Fontenele, Antonio J. Girardi-Schappo, Mauricio Feliciano, Thaís Aguiar, Leandro A. A. Silva, Thais P. L. de Vasconcelos, Nivaldo A. P. Carelli, Pedro V. Copelli, Mauro |
author_sort | Carvalho, Tawan T. A. |
collection | PubMed |
description | Recent experimental results on spike avalanches measured in the urethane-anesthetized rat cortex have revealed scaling relations that indicate a phase transition at a specific level of cortical firing rate variability. The scaling relations point to critical exponents whose values differ from those of a branching process, which has been the canonical model employed to understand brain criticality. This suggested that a different model, with a different phase transition, might be required to explain the data. Here we show that this is not necessarily the case. By employing two different models belonging to the same universality class as the branching process (mean-field directed percolation) and treating the simulation data exactly like experimental data, we reproduce most of the experimental results. We find that subsampling the model and adjusting the time bin used to define avalanches (as done with experimental data) are sufficient ingredients to change the apparent exponents of the critical point. Moreover, experimental data is only reproduced within a very narrow range in parameter space around the phase transition. |
format | Online Article Text |
id | pubmed-7843423 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-78434232021-01-30 Subsampled Directed-Percolation Models Explain Scaling Relations Experimentally Observed in the Brain Carvalho, Tawan T. A. Fontenele, Antonio J. Girardi-Schappo, Mauricio Feliciano, Thaís Aguiar, Leandro A. A. Silva, Thais P. L. de Vasconcelos, Nivaldo A. P. Carelli, Pedro V. Copelli, Mauro Front Neural Circuits Neuroscience Recent experimental results on spike avalanches measured in the urethane-anesthetized rat cortex have revealed scaling relations that indicate a phase transition at a specific level of cortical firing rate variability. The scaling relations point to critical exponents whose values differ from those of a branching process, which has been the canonical model employed to understand brain criticality. This suggested that a different model, with a different phase transition, might be required to explain the data. Here we show that this is not necessarily the case. By employing two different models belonging to the same universality class as the branching process (mean-field directed percolation) and treating the simulation data exactly like experimental data, we reproduce most of the experimental results. We find that subsampling the model and adjusting the time bin used to define avalanches (as done with experimental data) are sufficient ingredients to change the apparent exponents of the critical point. Moreover, experimental data is only reproduced within a very narrow range in parameter space around the phase transition. Frontiers Media S.A. 2021-01-15 /pmc/articles/PMC7843423/ /pubmed/33519388 http://dx.doi.org/10.3389/fncir.2020.576727 Text en Copyright © 2021 Carvalho, Fontenele, Girardi-Schappo, Feliciano, Aguiar, Silva, de Vasconcelos, Carelli and Copelli. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Carvalho, Tawan T. A. Fontenele, Antonio J. Girardi-Schappo, Mauricio Feliciano, Thaís Aguiar, Leandro A. A. Silva, Thais P. L. de Vasconcelos, Nivaldo A. P. Carelli, Pedro V. Copelli, Mauro Subsampled Directed-Percolation Models Explain Scaling Relations Experimentally Observed in the Brain |
title | Subsampled Directed-Percolation Models Explain Scaling Relations Experimentally Observed in the Brain |
title_full | Subsampled Directed-Percolation Models Explain Scaling Relations Experimentally Observed in the Brain |
title_fullStr | Subsampled Directed-Percolation Models Explain Scaling Relations Experimentally Observed in the Brain |
title_full_unstemmed | Subsampled Directed-Percolation Models Explain Scaling Relations Experimentally Observed in the Brain |
title_short | Subsampled Directed-Percolation Models Explain Scaling Relations Experimentally Observed in the Brain |
title_sort | subsampled directed-percolation models explain scaling relations experimentally observed in the brain |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7843423/ https://www.ncbi.nlm.nih.gov/pubmed/33519388 http://dx.doi.org/10.3389/fncir.2020.576727 |
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