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Evaluation and Comparison of the Efficiency of Transcription Terminators in Different Cyanobacterial Species

Cyanobacteria utilize sunlight to convert carbon dioxide into a wide variety of secondary metabolites and show great potential for green biotechnology applications. Although cyanobacterial synthetic biology is less mature than for other heterotrophic model organisms, there are now a range of molecul...

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Autores principales: Gale, Grant A. R., Wang, Baojun, McCormick, Alistair J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7843447/
https://www.ncbi.nlm.nih.gov/pubmed/33519785
http://dx.doi.org/10.3389/fmicb.2020.624011
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author Gale, Grant A. R.
Wang, Baojun
McCormick, Alistair J.
author_facet Gale, Grant A. R.
Wang, Baojun
McCormick, Alistair J.
author_sort Gale, Grant A. R.
collection PubMed
description Cyanobacteria utilize sunlight to convert carbon dioxide into a wide variety of secondary metabolites and show great potential for green biotechnology applications. Although cyanobacterial synthetic biology is less mature than for other heterotrophic model organisms, there are now a range of molecular tools available to modulate and control gene expression. One area of gene regulation that still lags behind other model organisms is the modulation of gene transcription, particularly transcription termination. A vast number of intrinsic transcription terminators are now available in heterotrophs, but only a small number have been investigated in cyanobacteria. As artificial gene expression systems become larger and more complex, with short stretches of DNA harboring strong promoters and multiple gene expression cassettes, the need to stop transcription efficiently and insulate downstream regions from unwanted interference is becoming more important. In this study, we adapted a dual reporter tool for use with the CyanoGate MoClo Assembly system that can quantify and compare the efficiency of terminator sequences within and between different species. We characterized 34 intrinsic terminators in Escherichia coli, Synechocystis sp. PCC 6803, and Synechococcus elongatus UTEX 2973 and observed significant differences in termination efficiencies. However, we also identified five terminators with termination efficiencies of >96% in all three species, indicating that some terminators can behave consistently in both heterotrophic species and cyanobacteria.
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spelling pubmed-78434472021-01-30 Evaluation and Comparison of the Efficiency of Transcription Terminators in Different Cyanobacterial Species Gale, Grant A. R. Wang, Baojun McCormick, Alistair J. Front Microbiol Microbiology Cyanobacteria utilize sunlight to convert carbon dioxide into a wide variety of secondary metabolites and show great potential for green biotechnology applications. Although cyanobacterial synthetic biology is less mature than for other heterotrophic model organisms, there are now a range of molecular tools available to modulate and control gene expression. One area of gene regulation that still lags behind other model organisms is the modulation of gene transcription, particularly transcription termination. A vast number of intrinsic transcription terminators are now available in heterotrophs, but only a small number have been investigated in cyanobacteria. As artificial gene expression systems become larger and more complex, with short stretches of DNA harboring strong promoters and multiple gene expression cassettes, the need to stop transcription efficiently and insulate downstream regions from unwanted interference is becoming more important. In this study, we adapted a dual reporter tool for use with the CyanoGate MoClo Assembly system that can quantify and compare the efficiency of terminator sequences within and between different species. We characterized 34 intrinsic terminators in Escherichia coli, Synechocystis sp. PCC 6803, and Synechococcus elongatus UTEX 2973 and observed significant differences in termination efficiencies. However, we also identified five terminators with termination efficiencies of >96% in all three species, indicating that some terminators can behave consistently in both heterotrophic species and cyanobacteria. Frontiers Media S.A. 2021-01-15 /pmc/articles/PMC7843447/ /pubmed/33519785 http://dx.doi.org/10.3389/fmicb.2020.624011 Text en Copyright © 2021 Gale, Wang and McCormick. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Gale, Grant A. R.
Wang, Baojun
McCormick, Alistair J.
Evaluation and Comparison of the Efficiency of Transcription Terminators in Different Cyanobacterial Species
title Evaluation and Comparison of the Efficiency of Transcription Terminators in Different Cyanobacterial Species
title_full Evaluation and Comparison of the Efficiency of Transcription Terminators in Different Cyanobacterial Species
title_fullStr Evaluation and Comparison of the Efficiency of Transcription Terminators in Different Cyanobacterial Species
title_full_unstemmed Evaluation and Comparison of the Efficiency of Transcription Terminators in Different Cyanobacterial Species
title_short Evaluation and Comparison of the Efficiency of Transcription Terminators in Different Cyanobacterial Species
title_sort evaluation and comparison of the efficiency of transcription terminators in different cyanobacterial species
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7843447/
https://www.ncbi.nlm.nih.gov/pubmed/33519785
http://dx.doi.org/10.3389/fmicb.2020.624011
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