Cargando…

Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants – Identification of Reservoir Resistome Signatures

Metagenomics can unveil the genetic content of the total microbiota in different environments, such as food products and the guts of humans and livestock. It is therefore considered of great potential to investigate the transmission of foodborne hazards as part of source-attribution studies. Source-...

Descripción completa

Detalles Bibliográficos
Autores principales:	Duarte, Ana Sofia Ribeiro, Röder, Timo, Van Gompel, Liese, Petersen, Thomas Nordahl, Hansen, Rasmus Borup, Hansen, Inge Marianne, Bossers, Alex, Aarestrup, Frank M., Wagenaar, Jaap A., Hald, Tine
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Frontiers Media S.A. 2021
Materias:	Microbiology
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7843941/ https://www.ncbi.nlm.nih.gov/pubmed/33519742 http://dx.doi.org/10.3389/fmicb.2020.601407

Ejemplares similares

Associations between antimicrobial use and the faecal resistome on broiler farms from nine European countries
por: Luiken, Roosmarijn E C, et al.
Publicado: (2019)

Addressing Learning Needs on the Use of Metagenomics in Antimicrobial Resistance Surveillance
por: Duarte, Ana Sofia Ribeiro, et al.
Publicado: (2020)

A curated data resource of 214K metagenomes for characterization of the global antimicrobial resistome
por: Martiny, Hannah-Marie, et al.
Publicado: (2022)

Source Attribution of Salmonella in Macadamia Nuts to Animal and Environmental Reservoirs in Queensland, Australia
por: Munck, Nanna, et al.
Publicado: (2020)

In-depth resistome analysis by targeted metagenomics
por: Lanza, Val F., et al.
Publicado: (2018)

Metagenomics analysis of the neonatal intestinal resistome
por: Leo, Stefano, et al.
Publicado: (2023)

Antibiotic resistomes of healthy pig faecal metagenomes
por: Joyce, Aoife, et al.
Publicado: (2019)

Metagenomic Insight into The Global Dissemination of The Antibiotic Resistome
por: Zhang, Qi, et al.
Publicado: (2023)

Global Distribution of mcr Gene Variants in 214K Metagenomic Samples
por: Martiny, Hannah-Marie, et al.
Publicado: (2022)

Metagenomic analysis reveals the microbiome and resistome in migratory birds
por: Cao, Jian, et al.
Publicado: (2020)

Metagenomic Insights into Chicken Gut Antibiotic Resistomes and Microbiomes
por: Yang, Jintao, et al.
Publicado: (2022)

Analysis of reservoir sources of Campylobacter isolates to free-range broilers in Denmark
por: Lassen, Brian, et al.
Publicado: (2023)

Translational metagenomics and the human resistome: confronting the menace of the new millennium
por: Willmann, Matthias, et al.
Publicado: (2016)

Metagenomic Characterization of the Microbiome and Resistome of Retail Ground Beef Products
por: Doster, Enrique, et al.
Publicado: (2020)

Impacts of florfenicol on the microbiota landscape and resistome as revealed by metagenomic analysis
por: Zeng, Qifan, et al.
Publicado: (2019)

Metagenomic analysis of an urban resistome before and after wastewater treatment
por: Lira, Felipe, et al.
Publicado: (2020)

Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces
por: Salaheen, Serajus, et al.
Publicado: (2021)

Pathogen surveillance in the informal settlement, Kibera, Kenya, using a metagenomics approach
por: Hendriksen, Rene S., et al.
Publicado: (2019)

The resistomes of rural and urban pigs and poultry in Ghana
por: Jensen, Emilie Egholm Bruun, et al.
Publicado: (2023)

MGmapper: Reference based mapping and taxonomy annotation of metagenomics sequence reads
por: Petersen, Thomas Nordahl, et al.
Publicado: (2017)

Antimicrobial resistance monitoring in the Danish swine production by phenotypic methods and metagenomics from 1999 to 2018
por: Duarte, Ana Sofia R., et al.
Publicado: (2023)

Correction: MGmapper: Reference based mapping and taxonomy annotation of metagenomics sequence reads
por: Petersen, Thomas Nordahl, et al.
Publicado: (2017)

Metagenomics of urban sewage identifies an extensively shared antibiotic resistome in China
por: Su, Jian-Qiang, et al.
Publicado: (2017)

Analysis of 1135 gut metagenomes identifies sex-specific resistome profiles
por: Sinha, Trishla, et al.
Publicado: (2018)

A metagenomic-based method to study hospital air dust resistome
por: Li, Xiang, et al.
Publicado: (2021)

Metagenomic insights into the antibiotic resistomes of typical Chinese dairy farm environments
por: Kang, Jijun, et al.
Publicado: (2022)

The effects of antibiotic use on the dynamics of the microbiome and resistome in pigs
por: Tams, Katrine Wegener, et al.
Publicado: (2023)

Assigning Defined Daily/Course Doses for Antimicrobials in Turkeys to Enable a Cross-Country Quantification and Comparison of Antimicrobial Use
por: Joosten, Philip, et al.
Publicado: (2021)

Resistome metagenomics from plate to farm: The resistome and microbial composition during food waste feeding and composting on a Vermont poultry farm
por: Eckstrom, Korin, et al.
Publicado: (2019)

Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage
por: Hendriksen, Rene S., et al.
Publicado: (2019)

Evaluating the mobility potential of antibiotic resistance genes in environmental resistomes without metagenomics
por: Pärnänen, Katariina, et al.
Publicado: (2016)

Enrichment allows identification of diverse, rare elements in metagenomic resistome-virulome sequencing
por: Noyes, Noelle R., et al.
Publicado: (2017)

Correction to: Metagenomics of urban sewage identifies an extensively shared antibiotic resistome in China
por: Su, Jian-Qiang, et al.
Publicado: (2018)

Mobile antibiotic resistome in wastewater treatment plants revealed by Nanopore metagenomic sequencing
por: Che, You, et al.
Publicado: (2019)

Toward a Metagenomic Understanding on the Bacterial Composition and Resistome in Hong Kong Banknotes
por: Heshiki, Yoshitaro, et al.
Publicado: (2017)

Vinasse fertirrigation alters soil resistome dynamics: an analysis based on metagenomic profiles
por: Braga, Lucas P. P., et al.
Publicado: (2017)

Multiplexed Target Enrichment Enables Efficient and In-Depth Analysis of Antimicrobial Resistome in Metagenomes
por: Li, Yiming, et al.
Publicado: (2022)

Metagenomes from Coastal Sediments of Kuwait: Insights into the Microbiome, Metabolic Functions and Resistome
por: Habibi, Nazima, et al.
Publicado: (2023)

Alterations in faecal microbiome and resistome in Chinese international travellers: a metagenomic analysis
por: Cheung, Man Kit, et al.
Publicado: (2023)

Characterization of antibiotic resistomes by reprogrammed bacteriophage-enabled functional metagenomics in clinical strains
por: Apjok, Gábor, et al.
Publicado: (2023)

Cannot write session to /tmp/vufind_sessions/sess_rk8h4o0l39b9vpklj97l30i9a2