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Deep COVID DeteCT: an international experience on COVID-19 lung detection and prognosis using chest CT
The Coronavirus disease 2019 (COVID-19) presents open questions in how we clinically diagnose and assess disease course. Recently, chest computed tomography (CT) has shown utility for COVID-19 diagnosis. In this study, we developed Deep COVID DeteCT (DCD), a deep learning convolutional neural networ...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7846563/ https://www.ncbi.nlm.nih.gov/pubmed/33514852 http://dx.doi.org/10.1038/s41746-020-00369-1 |
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author | Lee, Edward H. Zheng, Jimmy Colak, Errol Mohammadzadeh, Maryam Houshmand, Golnaz Bevins, Nicholas Kitamura, Felipe Altinmakas, Emre Reis, Eduardo Pontes Kim, Jae-Kwang Klochko, Chad Han, Michelle Moradian, Sadegh Mohammadzadeh, Ali Sharifian, Hashem Hashemi, Hassan Firouznia, Kavous Ghanaati, Hossien Gity, Masoumeh Doğan, Hakan Salehinejad, Hojjat Alves, Henrique Seekins, Jayne Abdala, Nitamar Atasoy, Çetin Pouraliakbar, Hamidreza Maleki, Majid Wong, S. Simon Yeom, Kristen W. |
author_facet | Lee, Edward H. Zheng, Jimmy Colak, Errol Mohammadzadeh, Maryam Houshmand, Golnaz Bevins, Nicholas Kitamura, Felipe Altinmakas, Emre Reis, Eduardo Pontes Kim, Jae-Kwang Klochko, Chad Han, Michelle Moradian, Sadegh Mohammadzadeh, Ali Sharifian, Hashem Hashemi, Hassan Firouznia, Kavous Ghanaati, Hossien Gity, Masoumeh Doğan, Hakan Salehinejad, Hojjat Alves, Henrique Seekins, Jayne Abdala, Nitamar Atasoy, Çetin Pouraliakbar, Hamidreza Maleki, Majid Wong, S. Simon Yeom, Kristen W. |
author_sort | Lee, Edward H. |
collection | PubMed |
description | The Coronavirus disease 2019 (COVID-19) presents open questions in how we clinically diagnose and assess disease course. Recently, chest computed tomography (CT) has shown utility for COVID-19 diagnosis. In this study, we developed Deep COVID DeteCT (DCD), a deep learning convolutional neural network (CNN) that uses the entire chest CT volume to automatically predict COVID-19 (COVID+) from non-COVID-19 (COVID−) pneumonia and normal controls. We discuss training strategies and differences in performance across 13 international institutions and 8 countries. The inclusion of non-China sites in training significantly improved classification performance with area under the curve (AUCs) and accuracies above 0.8 on most test sites. Furthermore, using available follow-up scans, we investigate methods to track patient disease course and predict prognosis. |
format | Online Article Text |
id | pubmed-7846563 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-78465632021-02-11 Deep COVID DeteCT: an international experience on COVID-19 lung detection and prognosis using chest CT Lee, Edward H. Zheng, Jimmy Colak, Errol Mohammadzadeh, Maryam Houshmand, Golnaz Bevins, Nicholas Kitamura, Felipe Altinmakas, Emre Reis, Eduardo Pontes Kim, Jae-Kwang Klochko, Chad Han, Michelle Moradian, Sadegh Mohammadzadeh, Ali Sharifian, Hashem Hashemi, Hassan Firouznia, Kavous Ghanaati, Hossien Gity, Masoumeh Doğan, Hakan Salehinejad, Hojjat Alves, Henrique Seekins, Jayne Abdala, Nitamar Atasoy, Çetin Pouraliakbar, Hamidreza Maleki, Majid Wong, S. Simon Yeom, Kristen W. NPJ Digit Med Article The Coronavirus disease 2019 (COVID-19) presents open questions in how we clinically diagnose and assess disease course. Recently, chest computed tomography (CT) has shown utility for COVID-19 diagnosis. In this study, we developed Deep COVID DeteCT (DCD), a deep learning convolutional neural network (CNN) that uses the entire chest CT volume to automatically predict COVID-19 (COVID+) from non-COVID-19 (COVID−) pneumonia and normal controls. We discuss training strategies and differences in performance across 13 international institutions and 8 countries. The inclusion of non-China sites in training significantly improved classification performance with area under the curve (AUCs) and accuracies above 0.8 on most test sites. Furthermore, using available follow-up scans, we investigate methods to track patient disease course and predict prognosis. Nature Publishing Group UK 2021-01-29 /pmc/articles/PMC7846563/ /pubmed/33514852 http://dx.doi.org/10.1038/s41746-020-00369-1 Text en © The Author(s) 2021 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Lee, Edward H. Zheng, Jimmy Colak, Errol Mohammadzadeh, Maryam Houshmand, Golnaz Bevins, Nicholas Kitamura, Felipe Altinmakas, Emre Reis, Eduardo Pontes Kim, Jae-Kwang Klochko, Chad Han, Michelle Moradian, Sadegh Mohammadzadeh, Ali Sharifian, Hashem Hashemi, Hassan Firouznia, Kavous Ghanaati, Hossien Gity, Masoumeh Doğan, Hakan Salehinejad, Hojjat Alves, Henrique Seekins, Jayne Abdala, Nitamar Atasoy, Çetin Pouraliakbar, Hamidreza Maleki, Majid Wong, S. Simon Yeom, Kristen W. Deep COVID DeteCT: an international experience on COVID-19 lung detection and prognosis using chest CT |
title | Deep COVID DeteCT: an international experience on COVID-19 lung detection and prognosis using chest CT |
title_full | Deep COVID DeteCT: an international experience on COVID-19 lung detection and prognosis using chest CT |
title_fullStr | Deep COVID DeteCT: an international experience on COVID-19 lung detection and prognosis using chest CT |
title_full_unstemmed | Deep COVID DeteCT: an international experience on COVID-19 lung detection and prognosis using chest CT |
title_short | Deep COVID DeteCT: an international experience on COVID-19 lung detection and prognosis using chest CT |
title_sort | deep covid detect: an international experience on covid-19 lung detection and prognosis using chest ct |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7846563/ https://www.ncbi.nlm.nih.gov/pubmed/33514852 http://dx.doi.org/10.1038/s41746-020-00369-1 |
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