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Identity: rapid alignment-free prediction of sequence alignment identity scores using self-supervised general linear models

Pairwise global alignment is a fundamental step in sequence analysis. Optimal alignment algorithms are quadratic—slow especially on long sequences. In many applications that involve large sequence datasets, all what is needed is calculating the identity scores (percentage of identical nucleotides in...

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Detalles Bibliográficos
Autores principales: Girgis, Hani Z, James, Benjamin T, Luczak, Brian B
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7850047/
https://www.ncbi.nlm.nih.gov/pubmed/33554117
http://dx.doi.org/10.1093/nargab/lqab001