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Identity: rapid alignment-free prediction of sequence alignment identity scores using self-supervised general linear models
Pairwise global alignment is a fundamental step in sequence analysis. Optimal alignment algorithms are quadratic—slow especially on long sequences. In many applications that involve large sequence datasets, all what is needed is calculating the identity scores (percentage of identical nucleotides in...
Autores principales: | Girgis, Hani Z, James, Benjamin T, Luczak, Brian B |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7850047/ https://www.ncbi.nlm.nih.gov/pubmed/33554117 http://dx.doi.org/10.1093/nargab/lqab001 |
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