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Characterization of the complete chloroplast genome of Canavalia gladiata
Canavalia gladiata is a member of genus Canavalia, which includes 60 species around world. And the species in genus of Canavalia have similar character so we use complete chloroplast genome to identify C. gladiata and other species. Here, we assembled and analyzed the complete chloroplast (cp) genom...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7850338/ https://www.ncbi.nlm.nih.gov/pubmed/33553637 http://dx.doi.org/10.1080/23802359.2020.1861566 |
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author | Zhao, Jun |
author_facet | Zhao, Jun |
author_sort | Zhao, Jun |
collection | PubMed |
description | Canavalia gladiata is a member of genus Canavalia, which includes 60 species around world. And the species in genus of Canavalia have similar character so we use complete chloroplast genome to identify C. gladiata and other species. Here, we assembled and analyzed the complete chloroplast (cp) genome of C. gladiata. The cp genome of C. gladiata is 157,923 bp, with a total GC content of 34.6%. The complete cp genome has a typical quadripartite structure, including a large single-copy (LSC) region of 77,660 bp, a small single-copy (SSC) region of 18,945 bp and two inverted repeat (IR(S)) regions of 30,659 bp. The complete cp genome contains 136 genes, including 91 protein-coding genes, 37tRNA and 8 rRNA genes. Phylogenetic analysis result showed that C. gladiata is closely related to C. rosea. |
format | Online Article Text |
id | pubmed-7850338 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78503382021-02-05 Characterization of the complete chloroplast genome of Canavalia gladiata Zhao, Jun Mitochondrial DNA B Resour Mitogenome Announcement Canavalia gladiata is a member of genus Canavalia, which includes 60 species around world. And the species in genus of Canavalia have similar character so we use complete chloroplast genome to identify C. gladiata and other species. Here, we assembled and analyzed the complete chloroplast (cp) genome of C. gladiata. The cp genome of C. gladiata is 157,923 bp, with a total GC content of 34.6%. The complete cp genome has a typical quadripartite structure, including a large single-copy (LSC) region of 77,660 bp, a small single-copy (SSC) region of 18,945 bp and two inverted repeat (IR(S)) regions of 30,659 bp. The complete cp genome contains 136 genes, including 91 protein-coding genes, 37tRNA and 8 rRNA genes. Phylogenetic analysis result showed that C. gladiata is closely related to C. rosea. Taylor & Francis 2021-01-27 /pmc/articles/PMC7850338/ /pubmed/33553637 http://dx.doi.org/10.1080/23802359.2020.1861566 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Zhao, Jun Characterization of the complete chloroplast genome of Canavalia gladiata |
title | Characterization of the complete chloroplast genome of Canavalia gladiata |
title_full | Characterization of the complete chloroplast genome of Canavalia gladiata |
title_fullStr | Characterization of the complete chloroplast genome of Canavalia gladiata |
title_full_unstemmed | Characterization of the complete chloroplast genome of Canavalia gladiata |
title_short | Characterization of the complete chloroplast genome of Canavalia gladiata |
title_sort | characterization of the complete chloroplast genome of canavalia gladiata |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7850338/ https://www.ncbi.nlm.nih.gov/pubmed/33553637 http://dx.doi.org/10.1080/23802359.2020.1861566 |
work_keys_str_mv | AT zhaojun characterizationofthecompletechloroplastgenomeofcanavaliagladiata |