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Characterization of the complete plastid genome of Lysimachia christinae Hance (Primulaceae)
Lysimachia christinae Hance is widely distributed in subtropical China at the elevational range from 500–2300 m. The species is an important medicinal herb for treating jaundice, urinary disorders, and the liver. Here, we sequenced and characterized the whole plastid genome of L. christinae. It is 1...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7850378/ https://www.ncbi.nlm.nih.gov/pubmed/33553641 http://dx.doi.org/10.1080/23802359.2020.1863873 |
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author | Zhang, Cai-Yun Yan, Hai-Fei Wang, Feng-Ying |
author_facet | Zhang, Cai-Yun Yan, Hai-Fei Wang, Feng-Ying |
author_sort | Zhang, Cai-Yun |
collection | PubMed |
description | Lysimachia christinae Hance is widely distributed in subtropical China at the elevational range from 500–2300 m. The species is an important medicinal herb for treating jaundice, urinary disorders, and the liver. Here, we sequenced and characterized the whole plastid genome of L. christinae. It is 154,810 bp in length, containing two copies of inverted repeat (IR) regions (26,034 bp, each), a large single-copy (LSC) region (84,809 bp), and a small single-copy (SSC) region (17,933 bp). It has 114 genes, of which 80 are protein-coding, 30 are tRNA, and 4 are rRNA genes. The ML tree indicates L. christinae is closely related to Lysimachia congestiflora Hemsl. This genome information can help us better construct a backbone phylogeny of Lysimachia in the future. |
format | Online Article Text |
id | pubmed-7850378 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78503782021-02-05 Characterization of the complete plastid genome of Lysimachia christinae Hance (Primulaceae) Zhang, Cai-Yun Yan, Hai-Fei Wang, Feng-Ying Mitochondrial DNA B Resour Mitogenome Announcement Lysimachia christinae Hance is widely distributed in subtropical China at the elevational range from 500–2300 m. The species is an important medicinal herb for treating jaundice, urinary disorders, and the liver. Here, we sequenced and characterized the whole plastid genome of L. christinae. It is 154,810 bp in length, containing two copies of inverted repeat (IR) regions (26,034 bp, each), a large single-copy (LSC) region (84,809 bp), and a small single-copy (SSC) region (17,933 bp). It has 114 genes, of which 80 are protein-coding, 30 are tRNA, and 4 are rRNA genes. The ML tree indicates L. christinae is closely related to Lysimachia congestiflora Hemsl. This genome information can help us better construct a backbone phylogeny of Lysimachia in the future. Taylor & Francis 2021-01-27 /pmc/articles/PMC7850378/ /pubmed/33553641 http://dx.doi.org/10.1080/23802359.2020.1863873 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Zhang, Cai-Yun Yan, Hai-Fei Wang, Feng-Ying Characterization of the complete plastid genome of Lysimachia christinae Hance (Primulaceae) |
title | Characterization of the complete plastid genome of Lysimachia christinae Hance (Primulaceae) |
title_full | Characterization of the complete plastid genome of Lysimachia christinae Hance (Primulaceae) |
title_fullStr | Characterization of the complete plastid genome of Lysimachia christinae Hance (Primulaceae) |
title_full_unstemmed | Characterization of the complete plastid genome of Lysimachia christinae Hance (Primulaceae) |
title_short | Characterization of the complete plastid genome of Lysimachia christinae Hance (Primulaceae) |
title_sort | characterization of the complete plastid genome of lysimachia christinae hance (primulaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7850378/ https://www.ncbi.nlm.nih.gov/pubmed/33553641 http://dx.doi.org/10.1080/23802359.2020.1863873 |
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