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A glucose meter interface for point-of-care gene circuit-based diagnostics

Recent advances in cell-free synthetic biology have given rise to gene circuit-based sensors with the potential to provide decentralized and low-cost molecular diagnostics. However, it remains a challenge to deliver this sensing capacity into the hands of users in a practical manner. Here, we levera...

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Autores principales: Amalfitano, Evan, Karlikow, Margot, Norouzi, Masoud, Jaenes, Katariina, Cicek, Seray, Masum, Fahim, Sadat Mousavi, Peivand, Guo, Yuxiu, Tang, Laura, Sydor, Andrew, Ma, Duo, Pearson, Joel D., Trcka, Daniel, Pinette, Mathieu, Ambagala, Aruna, Babiuk, Shawn, Pickering, Bradley, Wrana, Jeff, Bremner, Rod, Mazzulli, Tony, Sinton, David, Brumell, John H., Green, Alexander A., Pardee, Keith
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7851131/
https://www.ncbi.nlm.nih.gov/pubmed/33526784
http://dx.doi.org/10.1038/s41467-020-20639-6
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author Amalfitano, Evan
Karlikow, Margot
Norouzi, Masoud
Jaenes, Katariina
Cicek, Seray
Masum, Fahim
Sadat Mousavi, Peivand
Guo, Yuxiu
Tang, Laura
Sydor, Andrew
Ma, Duo
Pearson, Joel D.
Trcka, Daniel
Pinette, Mathieu
Ambagala, Aruna
Babiuk, Shawn
Pickering, Bradley
Wrana, Jeff
Bremner, Rod
Mazzulli, Tony
Sinton, David
Brumell, John H.
Green, Alexander A.
Pardee, Keith
author_facet Amalfitano, Evan
Karlikow, Margot
Norouzi, Masoud
Jaenes, Katariina
Cicek, Seray
Masum, Fahim
Sadat Mousavi, Peivand
Guo, Yuxiu
Tang, Laura
Sydor, Andrew
Ma, Duo
Pearson, Joel D.
Trcka, Daniel
Pinette, Mathieu
Ambagala, Aruna
Babiuk, Shawn
Pickering, Bradley
Wrana, Jeff
Bremner, Rod
Mazzulli, Tony
Sinton, David
Brumell, John H.
Green, Alexander A.
Pardee, Keith
author_sort Amalfitano, Evan
collection PubMed
description Recent advances in cell-free synthetic biology have given rise to gene circuit-based sensors with the potential to provide decentralized and low-cost molecular diagnostics. However, it remains a challenge to deliver this sensing capacity into the hands of users in a practical manner. Here, we leverage the glucose meter, one of the most widely available point-of-care sensing devices, to serve as a universal reader for these decentralized diagnostics. We describe a molecular translator that can convert the activation of conventional gene circuit-based sensors into a glucose output that can be read by off-the-shelf glucose meters. We show the development of new glucogenic reporter systems, multiplexed reporter outputs and detection of nucleic acid targets down to the low attomolar range. Using this glucose-meter interface, we demonstrate the detection of a small-molecule analyte; sample-to-result diagnostics for typhoid, paratyphoid A/B; and show the potential for pandemic response with nucleic acid sensors for SARS-CoV-2.
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spelling pubmed-78511312021-02-08 A glucose meter interface for point-of-care gene circuit-based diagnostics Amalfitano, Evan Karlikow, Margot Norouzi, Masoud Jaenes, Katariina Cicek, Seray Masum, Fahim Sadat Mousavi, Peivand Guo, Yuxiu Tang, Laura Sydor, Andrew Ma, Duo Pearson, Joel D. Trcka, Daniel Pinette, Mathieu Ambagala, Aruna Babiuk, Shawn Pickering, Bradley Wrana, Jeff Bremner, Rod Mazzulli, Tony Sinton, David Brumell, John H. Green, Alexander A. Pardee, Keith Nat Commun Article Recent advances in cell-free synthetic biology have given rise to gene circuit-based sensors with the potential to provide decentralized and low-cost molecular diagnostics. However, it remains a challenge to deliver this sensing capacity into the hands of users in a practical manner. Here, we leverage the glucose meter, one of the most widely available point-of-care sensing devices, to serve as a universal reader for these decentralized diagnostics. We describe a molecular translator that can convert the activation of conventional gene circuit-based sensors into a glucose output that can be read by off-the-shelf glucose meters. We show the development of new glucogenic reporter systems, multiplexed reporter outputs and detection of nucleic acid targets down to the low attomolar range. Using this glucose-meter interface, we demonstrate the detection of a small-molecule analyte; sample-to-result diagnostics for typhoid, paratyphoid A/B; and show the potential for pandemic response with nucleic acid sensors for SARS-CoV-2. Nature Publishing Group UK 2021-02-01 /pmc/articles/PMC7851131/ /pubmed/33526784 http://dx.doi.org/10.1038/s41467-020-20639-6 Text en © The Author(s) 2021 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Amalfitano, Evan
Karlikow, Margot
Norouzi, Masoud
Jaenes, Katariina
Cicek, Seray
Masum, Fahim
Sadat Mousavi, Peivand
Guo, Yuxiu
Tang, Laura
Sydor, Andrew
Ma, Duo
Pearson, Joel D.
Trcka, Daniel
Pinette, Mathieu
Ambagala, Aruna
Babiuk, Shawn
Pickering, Bradley
Wrana, Jeff
Bremner, Rod
Mazzulli, Tony
Sinton, David
Brumell, John H.
Green, Alexander A.
Pardee, Keith
A glucose meter interface for point-of-care gene circuit-based diagnostics
title A glucose meter interface for point-of-care gene circuit-based diagnostics
title_full A glucose meter interface for point-of-care gene circuit-based diagnostics
title_fullStr A glucose meter interface for point-of-care gene circuit-based diagnostics
title_full_unstemmed A glucose meter interface for point-of-care gene circuit-based diagnostics
title_short A glucose meter interface for point-of-care gene circuit-based diagnostics
title_sort glucose meter interface for point-of-care gene circuit-based diagnostics
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7851131/
https://www.ncbi.nlm.nih.gov/pubmed/33526784
http://dx.doi.org/10.1038/s41467-020-20639-6
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