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A new framework for MR diffusion tensor distribution
The ability to characterize heterogeneous and anisotropic water diffusion processes within macroscopic MRI voxels non-invasively and in vivo is a desideratum in biology, neuroscience, and medicine. While an MRI voxel may contain approximately a microliter of tissue, our goal is to examine intravoxel...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7854653/ https://www.ncbi.nlm.nih.gov/pubmed/33531530 http://dx.doi.org/10.1038/s41598-021-81264-x |
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author | Magdoom, Kulam Najmudeen Pajevic, Sinisa Dario, Gasbarra Basser, Peter J. |
author_facet | Magdoom, Kulam Najmudeen Pajevic, Sinisa Dario, Gasbarra Basser, Peter J. |
author_sort | Magdoom, Kulam Najmudeen |
collection | PubMed |
description | The ability to characterize heterogeneous and anisotropic water diffusion processes within macroscopic MRI voxels non-invasively and in vivo is a desideratum in biology, neuroscience, and medicine. While an MRI voxel may contain approximately a microliter of tissue, our goal is to examine intravoxel diffusion processes on the order of picoliters. Here we propose a new theoretical framework and efficient experimental design to describe and measure such intravoxel structural heterogeneity and anisotropy. We assume that a constrained normal tensor-variate distribution (CNTVD) describes the variability of positive definite diffusion tensors within a voxel which extends its applicability to a wide range of b-values while preserving the richness of diffusion tensor distribution (DTD) paradigm unlike existing models. We introduce a new Monte Carlo (MC) scheme to synthesize realistic 6D DTD numerical phantoms and invert the MR signal. We show that the signal inversion is well-posed and estimate the CNTVD parameters parsimoniously by exploiting the different symmetries of the mean and covariance tensors of CNTVD. The robustness of the estimation pipeline is assessed by adding noise to calculated MR signals and compared with the ground truth. A family of invariant parameters and glyphs which characterize microscopic shape, size and orientation heterogeneity within a voxel are also presented. |
format | Online Article Text |
id | pubmed-7854653 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-78546532021-02-03 A new framework for MR diffusion tensor distribution Magdoom, Kulam Najmudeen Pajevic, Sinisa Dario, Gasbarra Basser, Peter J. Sci Rep Article The ability to characterize heterogeneous and anisotropic water diffusion processes within macroscopic MRI voxels non-invasively and in vivo is a desideratum in biology, neuroscience, and medicine. While an MRI voxel may contain approximately a microliter of tissue, our goal is to examine intravoxel diffusion processes on the order of picoliters. Here we propose a new theoretical framework and efficient experimental design to describe and measure such intravoxel structural heterogeneity and anisotropy. We assume that a constrained normal tensor-variate distribution (CNTVD) describes the variability of positive definite diffusion tensors within a voxel which extends its applicability to a wide range of b-values while preserving the richness of diffusion tensor distribution (DTD) paradigm unlike existing models. We introduce a new Monte Carlo (MC) scheme to synthesize realistic 6D DTD numerical phantoms and invert the MR signal. We show that the signal inversion is well-posed and estimate the CNTVD parameters parsimoniously by exploiting the different symmetries of the mean and covariance tensors of CNTVD. The robustness of the estimation pipeline is assessed by adding noise to calculated MR signals and compared with the ground truth. A family of invariant parameters and glyphs which characterize microscopic shape, size and orientation heterogeneity within a voxel are also presented. Nature Publishing Group UK 2021-02-02 /pmc/articles/PMC7854653/ /pubmed/33531530 http://dx.doi.org/10.1038/s41598-021-81264-x Text en © This is a U.S. Government work and not under copyright protection in the US; foreign copyright protection may apply 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Magdoom, Kulam Najmudeen Pajevic, Sinisa Dario, Gasbarra Basser, Peter J. A new framework for MR diffusion tensor distribution |
title | A new framework for MR diffusion tensor distribution |
title_full | A new framework for MR diffusion tensor distribution |
title_fullStr | A new framework for MR diffusion tensor distribution |
title_full_unstemmed | A new framework for MR diffusion tensor distribution |
title_short | A new framework for MR diffusion tensor distribution |
title_sort | new framework for mr diffusion tensor distribution |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7854653/ https://www.ncbi.nlm.nih.gov/pubmed/33531530 http://dx.doi.org/10.1038/s41598-021-81264-x |
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