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Modeling the activity of the dopamine signaling pathway by combination of analog electrical circuit and mathematical approaches

This paper demonstrates the application of the system biology principles on the example of the dopamine signaling pathway in neurons. Presented model is based on two approaches – cytomorphic electronic circuits and mathematical modeling. Transcription and phosphorylation of DARPP-32 was modeled by a...

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Detalles Bibliográficos
Autores principales: Shumilov, A.V., Gotovtsev, P.M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7855338/
https://www.ncbi.nlm.nih.gov/pubmed/33553717
http://dx.doi.org/10.1016/j.heliyon.2020.e05879
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author Shumilov, A.V.
Gotovtsev, P.M.
author_facet Shumilov, A.V.
Gotovtsev, P.M.
author_sort Shumilov, A.V.
collection PubMed
description This paper demonstrates the application of the system biology principles on the example of the dopamine signaling pathway in neurons. Presented model is based on two approaches – cytomorphic electronic circuits and mathematical modeling. Transcription and phosphorylation of DARPP-32 was modeled by analog circuit, based on well-known approaches presented in [1]. It was shown that application of circuit helps to receive signal oscillations that close to described ones in real biological systems. This combination on the one hand gives possibility to simplify calculations, on another to show this signaling pathway dynamics. The expected effect of changes in the functioning of calcium channels is considered, and the mathematical model of the interaction of system components is proposed. The average frequency of calcium current oscillations due to the presence of dopamine was 30 Hz in presented model, that is consistent with the literature, where the frequency of such oscillations is up to several tens of Hz. All presented results shows good correlation with known data, which already published today.
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spelling pubmed-78553382021-02-05 Modeling the activity of the dopamine signaling pathway by combination of analog electrical circuit and mathematical approaches Shumilov, A.V. Gotovtsev, P.M. Heliyon Research Article This paper demonstrates the application of the system biology principles on the example of the dopamine signaling pathway in neurons. Presented model is based on two approaches – cytomorphic electronic circuits and mathematical modeling. Transcription and phosphorylation of DARPP-32 was modeled by analog circuit, based on well-known approaches presented in [1]. It was shown that application of circuit helps to receive signal oscillations that close to described ones in real biological systems. This combination on the one hand gives possibility to simplify calculations, on another to show this signaling pathway dynamics. The expected effect of changes in the functioning of calcium channels is considered, and the mathematical model of the interaction of system components is proposed. The average frequency of calcium current oscillations due to the presence of dopamine was 30 Hz in presented model, that is consistent with the literature, where the frequency of such oscillations is up to several tens of Hz. All presented results shows good correlation with known data, which already published today. Elsevier 2021-01-06 /pmc/articles/PMC7855338/ /pubmed/33553717 http://dx.doi.org/10.1016/j.heliyon.2020.e05879 Text en © 2020 The Author(s) http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Article
Shumilov, A.V.
Gotovtsev, P.M.
Modeling the activity of the dopamine signaling pathway by combination of analog electrical circuit and mathematical approaches
title Modeling the activity of the dopamine signaling pathway by combination of analog electrical circuit and mathematical approaches
title_full Modeling the activity of the dopamine signaling pathway by combination of analog electrical circuit and mathematical approaches
title_fullStr Modeling the activity of the dopamine signaling pathway by combination of analog electrical circuit and mathematical approaches
title_full_unstemmed Modeling the activity of the dopamine signaling pathway by combination of analog electrical circuit and mathematical approaches
title_short Modeling the activity of the dopamine signaling pathway by combination of analog electrical circuit and mathematical approaches
title_sort modeling the activity of the dopamine signaling pathway by combination of analog electrical circuit and mathematical approaches
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7855338/
https://www.ncbi.nlm.nih.gov/pubmed/33553717
http://dx.doi.org/10.1016/j.heliyon.2020.e05879
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