Cargando…

A method to mitigate spatio‐temporally varying task‐correlated motion artifacts from overt‐speech fMRI paradigms in aphasia

Quantifying accurate functional magnetic resonance imaging (fMRI) activation maps can be dampened by spatio‐temporally varying task‐correlated motion (TCM) artifacts in certain task paradigms (e.g., overt speech). Such real‐world tasks are relevant to characterize longitudinal brain reorganization p...

Descripción completa

Detalles Bibliográficos
Autores principales: Krishnamurthy, Venkatagiri, Krishnamurthy, Lisa C., Meadows, M. Lawson, Gale, Mary K., Ji, Bing, Gopinath, Kaundinya, Crosson, Bruce
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons, Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7856637/
https://www.ncbi.nlm.nih.gov/pubmed/33210749
http://dx.doi.org/10.1002/hbm.25280
_version_ 1783646285924925440
author Krishnamurthy, Venkatagiri
Krishnamurthy, Lisa C.
Meadows, M. Lawson
Gale, Mary K.
Ji, Bing
Gopinath, Kaundinya
Crosson, Bruce
author_facet Krishnamurthy, Venkatagiri
Krishnamurthy, Lisa C.
Meadows, M. Lawson
Gale, Mary K.
Ji, Bing
Gopinath, Kaundinya
Crosson, Bruce
author_sort Krishnamurthy, Venkatagiri
collection PubMed
description Quantifying accurate functional magnetic resonance imaging (fMRI) activation maps can be dampened by spatio‐temporally varying task‐correlated motion (TCM) artifacts in certain task paradigms (e.g., overt speech). Such real‐world tasks are relevant to characterize longitudinal brain reorganization poststroke, and removal of TCM artifacts is vital for improved clinical interpretation and translation. In this study, we developed a novel independent component analysis (ICA)‐based approach to denoise spatio‐temporally varying TCM artifacts in 14 persons with aphasia who participated in an overt language fMRI paradigm. We compared the new methodology with other existing approaches such as “standard” volume registration, nonselective motion correction ICA packages (i.e., AROMA), and combining the novel approach with AROMA. Results show that the proposed methodology outperforms other approaches in removing TCM‐related false positive activity (i.e., improved detectability power) with high spatial specificity. The proposed method was also effective in maintaining a balance between removal of TCM‐related trial‐by‐trial variability and signal retention. Finally, we show that the TCM artifact is related to clinical metrics, such as speech fluency and aphasia severity, and the implication of TCM denoising on such relationship is also discussed. Overall, our work suggests that routine bulkhead motion based denoising packages cannot effectively account for spatio‐temporally varying TCM. Further, the proposed TCM denoising approach requires a one‐time front‐end effort to hand label and train the classifiers that can be cost‐effectively utilized to denoise large clinical data sets.
format Online
Article
Text
id pubmed-7856637
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher John Wiley & Sons, Inc.
record_format MEDLINE/PubMed
spelling pubmed-78566372021-02-05 A method to mitigate spatio‐temporally varying task‐correlated motion artifacts from overt‐speech fMRI paradigms in aphasia Krishnamurthy, Venkatagiri Krishnamurthy, Lisa C. Meadows, M. Lawson Gale, Mary K. Ji, Bing Gopinath, Kaundinya Crosson, Bruce Hum Brain Mapp Research Articles Quantifying accurate functional magnetic resonance imaging (fMRI) activation maps can be dampened by spatio‐temporally varying task‐correlated motion (TCM) artifacts in certain task paradigms (e.g., overt speech). Such real‐world tasks are relevant to characterize longitudinal brain reorganization poststroke, and removal of TCM artifacts is vital for improved clinical interpretation and translation. In this study, we developed a novel independent component analysis (ICA)‐based approach to denoise spatio‐temporally varying TCM artifacts in 14 persons with aphasia who participated in an overt language fMRI paradigm. We compared the new methodology with other existing approaches such as “standard” volume registration, nonselective motion correction ICA packages (i.e., AROMA), and combining the novel approach with AROMA. Results show that the proposed methodology outperforms other approaches in removing TCM‐related false positive activity (i.e., improved detectability power) with high spatial specificity. The proposed method was also effective in maintaining a balance between removal of TCM‐related trial‐by‐trial variability and signal retention. Finally, we show that the TCM artifact is related to clinical metrics, such as speech fluency and aphasia severity, and the implication of TCM denoising on such relationship is also discussed. Overall, our work suggests that routine bulkhead motion based denoising packages cannot effectively account for spatio‐temporally varying TCM. Further, the proposed TCM denoising approach requires a one‐time front‐end effort to hand label and train the classifiers that can be cost‐effectively utilized to denoise large clinical data sets. John Wiley & Sons, Inc. 2020-11-19 /pmc/articles/PMC7856637/ /pubmed/33210749 http://dx.doi.org/10.1002/hbm.25280 Text en © 2020 The Authors. Human Brain Mapping published by Wiley Periodicals LLC. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Krishnamurthy, Venkatagiri
Krishnamurthy, Lisa C.
Meadows, M. Lawson
Gale, Mary K.
Ji, Bing
Gopinath, Kaundinya
Crosson, Bruce
A method to mitigate spatio‐temporally varying task‐correlated motion artifacts from overt‐speech fMRI paradigms in aphasia
title A method to mitigate spatio‐temporally varying task‐correlated motion artifacts from overt‐speech fMRI paradigms in aphasia
title_full A method to mitigate spatio‐temporally varying task‐correlated motion artifacts from overt‐speech fMRI paradigms in aphasia
title_fullStr A method to mitigate spatio‐temporally varying task‐correlated motion artifacts from overt‐speech fMRI paradigms in aphasia
title_full_unstemmed A method to mitigate spatio‐temporally varying task‐correlated motion artifacts from overt‐speech fMRI paradigms in aphasia
title_short A method to mitigate spatio‐temporally varying task‐correlated motion artifacts from overt‐speech fMRI paradigms in aphasia
title_sort method to mitigate spatio‐temporally varying task‐correlated motion artifacts from overt‐speech fmri paradigms in aphasia
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7856637/
https://www.ncbi.nlm.nih.gov/pubmed/33210749
http://dx.doi.org/10.1002/hbm.25280
work_keys_str_mv AT krishnamurthyvenkatagiri amethodtomitigatespatiotemporallyvaryingtaskcorrelatedmotionartifactsfromovertspeechfmriparadigmsinaphasia
AT krishnamurthylisac amethodtomitigatespatiotemporallyvaryingtaskcorrelatedmotionartifactsfromovertspeechfmriparadigmsinaphasia
AT meadowsmlawson amethodtomitigatespatiotemporallyvaryingtaskcorrelatedmotionartifactsfromovertspeechfmriparadigmsinaphasia
AT galemaryk amethodtomitigatespatiotemporallyvaryingtaskcorrelatedmotionartifactsfromovertspeechfmriparadigmsinaphasia
AT jibing amethodtomitigatespatiotemporallyvaryingtaskcorrelatedmotionartifactsfromovertspeechfmriparadigmsinaphasia
AT gopinathkaundinya amethodtomitigatespatiotemporallyvaryingtaskcorrelatedmotionartifactsfromovertspeechfmriparadigmsinaphasia
AT crossonbruce amethodtomitigatespatiotemporallyvaryingtaskcorrelatedmotionartifactsfromovertspeechfmriparadigmsinaphasia
AT krishnamurthyvenkatagiri methodtomitigatespatiotemporallyvaryingtaskcorrelatedmotionartifactsfromovertspeechfmriparadigmsinaphasia
AT krishnamurthylisac methodtomitigatespatiotemporallyvaryingtaskcorrelatedmotionartifactsfromovertspeechfmriparadigmsinaphasia
AT meadowsmlawson methodtomitigatespatiotemporallyvaryingtaskcorrelatedmotionartifactsfromovertspeechfmriparadigmsinaphasia
AT galemaryk methodtomitigatespatiotemporallyvaryingtaskcorrelatedmotionartifactsfromovertspeechfmriparadigmsinaphasia
AT jibing methodtomitigatespatiotemporallyvaryingtaskcorrelatedmotionartifactsfromovertspeechfmriparadigmsinaphasia
AT gopinathkaundinya methodtomitigatespatiotemporallyvaryingtaskcorrelatedmotionartifactsfromovertspeechfmriparadigmsinaphasia
AT crossonbruce methodtomitigatespatiotemporallyvaryingtaskcorrelatedmotionartifactsfromovertspeechfmriparadigmsinaphasia