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Robustness of magnetic resonance radiomic features to pixel size resampling and interpolation in patients with cervical cancer
BACKGROUND: Radiomics is a promising field in oncology imaging. However, the implementation of radiomics clinically has been limited because its robustness remains unclear. Previous CT and PET studies suggested that radiomic features were sensitive to variations in pixel size and slice thickness of...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7856733/ https://www.ncbi.nlm.nih.gov/pubmed/33531073 http://dx.doi.org/10.1186/s40644-021-00388-5 |
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author | Park, Shin-Hyung Lim, Hyejin Bae, Bong Kyung Hahm, Myong Hun Chong, Gun Oh Jeong, Shin Young Kim, Jae-Chul |
author_facet | Park, Shin-Hyung Lim, Hyejin Bae, Bong Kyung Hahm, Myong Hun Chong, Gun Oh Jeong, Shin Young Kim, Jae-Chul |
author_sort | Park, Shin-Hyung |
collection | PubMed |
description | BACKGROUND: Radiomics is a promising field in oncology imaging. However, the implementation of radiomics clinically has been limited because its robustness remains unclear. Previous CT and PET studies suggested that radiomic features were sensitive to variations in pixel size and slice thickness of the images. The purpose of this study was to assess robustness of magnetic resonance (MR) radiomic features to pixel size resampling and interpolation in patients with cervical cancer. METHODS: This retrospective study included 254 patients with a pathological diagnosis of cervical cancer stages IB to IVA who received definitive chemoradiation at our institution between January 2006 and June 2020. Pretreatment MR scans were analyzed. Each region of cervical cancer was segmented on the axial gadolinium-enhanced T1- and T2-weighted images; 107 radiomic features were extracted. MR scans were interpolated and resampled using various slice thicknesses and pixel spaces. Intraclass correlation coefficients (ICCs) were calculated between the original images and images that underwent pixel size resampling (OP), interpolation (OI), or pixel size resampling and interpolation (OP+I) as well as among processed image sets with various pixel spaces (P), various slice thicknesses (I), and both (P + I). RESULTS: After feature standardization, ≥86.0% of features showed good robustness when compared between the original and processed images (OP, OI, and OP+I) and ≥ 88.8% of features showed good robustness when processed images were compared (P, I, and P + I). Although most first-order, shape, and texture features showed good robustness, GLSZM small-area emphasis-related features and NGTDM strength were sensitive to variations in pixel size and slice thickness. CONCLUSION: Most MR radiomic features in patients with cervical cancer were robust after pixel size resampling and interpolation following the feature standardization process. The understanding regarding the robustness of individual features after pixel size resampling and interpolation could help future radiomics research. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s40644-021-00388-5. |
format | Online Article Text |
id | pubmed-7856733 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-78567332021-02-04 Robustness of magnetic resonance radiomic features to pixel size resampling and interpolation in patients with cervical cancer Park, Shin-Hyung Lim, Hyejin Bae, Bong Kyung Hahm, Myong Hun Chong, Gun Oh Jeong, Shin Young Kim, Jae-Chul Cancer Imaging Research Article BACKGROUND: Radiomics is a promising field in oncology imaging. However, the implementation of radiomics clinically has been limited because its robustness remains unclear. Previous CT and PET studies suggested that radiomic features were sensitive to variations in pixel size and slice thickness of the images. The purpose of this study was to assess robustness of magnetic resonance (MR) radiomic features to pixel size resampling and interpolation in patients with cervical cancer. METHODS: This retrospective study included 254 patients with a pathological diagnosis of cervical cancer stages IB to IVA who received definitive chemoradiation at our institution between January 2006 and June 2020. Pretreatment MR scans were analyzed. Each region of cervical cancer was segmented on the axial gadolinium-enhanced T1- and T2-weighted images; 107 radiomic features were extracted. MR scans were interpolated and resampled using various slice thicknesses and pixel spaces. Intraclass correlation coefficients (ICCs) were calculated between the original images and images that underwent pixel size resampling (OP), interpolation (OI), or pixel size resampling and interpolation (OP+I) as well as among processed image sets with various pixel spaces (P), various slice thicknesses (I), and both (P + I). RESULTS: After feature standardization, ≥86.0% of features showed good robustness when compared between the original and processed images (OP, OI, and OP+I) and ≥ 88.8% of features showed good robustness when processed images were compared (P, I, and P + I). Although most first-order, shape, and texture features showed good robustness, GLSZM small-area emphasis-related features and NGTDM strength were sensitive to variations in pixel size and slice thickness. CONCLUSION: Most MR radiomic features in patients with cervical cancer were robust after pixel size resampling and interpolation following the feature standardization process. The understanding regarding the robustness of individual features after pixel size resampling and interpolation could help future radiomics research. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s40644-021-00388-5. BioMed Central 2021-02-02 /pmc/articles/PMC7856733/ /pubmed/33531073 http://dx.doi.org/10.1186/s40644-021-00388-5 Text en © The Author(s) 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Article Park, Shin-Hyung Lim, Hyejin Bae, Bong Kyung Hahm, Myong Hun Chong, Gun Oh Jeong, Shin Young Kim, Jae-Chul Robustness of magnetic resonance radiomic features to pixel size resampling and interpolation in patients with cervical cancer |
title | Robustness of magnetic resonance radiomic features to pixel size resampling and interpolation in patients with cervical cancer |
title_full | Robustness of magnetic resonance radiomic features to pixel size resampling and interpolation in patients with cervical cancer |
title_fullStr | Robustness of magnetic resonance radiomic features to pixel size resampling and interpolation in patients with cervical cancer |
title_full_unstemmed | Robustness of magnetic resonance radiomic features to pixel size resampling and interpolation in patients with cervical cancer |
title_short | Robustness of magnetic resonance radiomic features to pixel size resampling and interpolation in patients with cervical cancer |
title_sort | robustness of magnetic resonance radiomic features to pixel size resampling and interpolation in patients with cervical cancer |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7856733/ https://www.ncbi.nlm.nih.gov/pubmed/33531073 http://dx.doi.org/10.1186/s40644-021-00388-5 |
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