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Neutrophil degranulation interconnects over-represented biological processes in atrial fibrillation
Despite our expanding knowledge about the mechanism underlying atrial fibrillation (AF), the interplay between the biological events underlying AF remains incompletely understood. This study aimed to identify the functionally enriched gene-sets in AF and capture their interconnection via pivotal fac...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7859227/ https://www.ncbi.nlm.nih.gov/pubmed/33536523 http://dx.doi.org/10.1038/s41598-021-82533-5 |
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author | Kawasaki, Makiri Meulendijks, Eva R. van den Berg, Nicoline W. E. Nariswari, Fransisca A. Neefs, Jolien Wesselink, Robin Baalman, Sarah W. E. Jongejan, Aldo Schelfhorst, Tim Piersma, Sander R. Pham, Thang V. van Boven, Wim J. P. Driessen, Antoine H. G. Jimenez, Connie R. de Groot, Joris R. |
author_facet | Kawasaki, Makiri Meulendijks, Eva R. van den Berg, Nicoline W. E. Nariswari, Fransisca A. Neefs, Jolien Wesselink, Robin Baalman, Sarah W. E. Jongejan, Aldo Schelfhorst, Tim Piersma, Sander R. Pham, Thang V. van Boven, Wim J. P. Driessen, Antoine H. G. Jimenez, Connie R. de Groot, Joris R. |
author_sort | Kawasaki, Makiri |
collection | PubMed |
description | Despite our expanding knowledge about the mechanism underlying atrial fibrillation (AF), the interplay between the biological events underlying AF remains incompletely understood. This study aimed to identify the functionally enriched gene-sets in AF and capture their interconnection via pivotal factors, that may drive or be driven by AF. Global abundance of the proteins in the left atrium of AF patients compared to control patients (n = 3/group), and the functionally enriched biological processes in AF were determined by mass-spectrometry and gene set enrichment analysis, respectively. The data were validated in an independent cohort (n = 19–20/group). In AF, the gene-sets of innate immune system, metabolic process, cellular component disassembly and ion homeostasis were up-regulated, while the gene-set of ciliogenesis was down-regulated. The innate immune system was over-represented by neutrophil degranulation, the components of which were extensively shared by other gene-sets altered in AF. In the independent cohort, an activated form of neutrophils was more present in the left atrium of AF patients with the increased gene expression of neutrophil granules. MYH10, required for ciliogenesis, was decreased in the atrial fibroblasts of AF patients. We report the increased neutrophil degranulation appears to play a pivotal role, and affects multiple biological processes altered in AF. |
format | Online Article Text |
id | pubmed-7859227 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-78592272021-02-04 Neutrophil degranulation interconnects over-represented biological processes in atrial fibrillation Kawasaki, Makiri Meulendijks, Eva R. van den Berg, Nicoline W. E. Nariswari, Fransisca A. Neefs, Jolien Wesselink, Robin Baalman, Sarah W. E. Jongejan, Aldo Schelfhorst, Tim Piersma, Sander R. Pham, Thang V. van Boven, Wim J. P. Driessen, Antoine H. G. Jimenez, Connie R. de Groot, Joris R. Sci Rep Article Despite our expanding knowledge about the mechanism underlying atrial fibrillation (AF), the interplay between the biological events underlying AF remains incompletely understood. This study aimed to identify the functionally enriched gene-sets in AF and capture their interconnection via pivotal factors, that may drive or be driven by AF. Global abundance of the proteins in the left atrium of AF patients compared to control patients (n = 3/group), and the functionally enriched biological processes in AF were determined by mass-spectrometry and gene set enrichment analysis, respectively. The data were validated in an independent cohort (n = 19–20/group). In AF, the gene-sets of innate immune system, metabolic process, cellular component disassembly and ion homeostasis were up-regulated, while the gene-set of ciliogenesis was down-regulated. The innate immune system was over-represented by neutrophil degranulation, the components of which were extensively shared by other gene-sets altered in AF. In the independent cohort, an activated form of neutrophils was more present in the left atrium of AF patients with the increased gene expression of neutrophil granules. MYH10, required for ciliogenesis, was decreased in the atrial fibroblasts of AF patients. We report the increased neutrophil degranulation appears to play a pivotal role, and affects multiple biological processes altered in AF. Nature Publishing Group UK 2021-02-03 /pmc/articles/PMC7859227/ /pubmed/33536523 http://dx.doi.org/10.1038/s41598-021-82533-5 Text en © The Author(s) 2021 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Kawasaki, Makiri Meulendijks, Eva R. van den Berg, Nicoline W. E. Nariswari, Fransisca A. Neefs, Jolien Wesselink, Robin Baalman, Sarah W. E. Jongejan, Aldo Schelfhorst, Tim Piersma, Sander R. Pham, Thang V. van Boven, Wim J. P. Driessen, Antoine H. G. Jimenez, Connie R. de Groot, Joris R. Neutrophil degranulation interconnects over-represented biological processes in atrial fibrillation |
title | Neutrophil degranulation interconnects over-represented biological processes in atrial fibrillation |
title_full | Neutrophil degranulation interconnects over-represented biological processes in atrial fibrillation |
title_fullStr | Neutrophil degranulation interconnects over-represented biological processes in atrial fibrillation |
title_full_unstemmed | Neutrophil degranulation interconnects over-represented biological processes in atrial fibrillation |
title_short | Neutrophil degranulation interconnects over-represented biological processes in atrial fibrillation |
title_sort | neutrophil degranulation interconnects over-represented biological processes in atrial fibrillation |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7859227/ https://www.ncbi.nlm.nih.gov/pubmed/33536523 http://dx.doi.org/10.1038/s41598-021-82533-5 |
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