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Draft genome sequence data of the facultative, thermophilic, xylanolytic bacterium Paenibacillus sp. strain DA-C8

Thermophilic, facultatively anaerobic, xylanolytic bacterial strain DA-C8 (=JCM34211 =DSM111723), newly isolated from compost, shows strong beechwood xylan degradation ability. Whole-genome sequencing of strain DA-C8 on the Ion GeneStudio S5 system yielded 69 contigs with a total size of 3,110,565 b...

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Autores principales: Chhe, Chinda, Uke, Ayaka, Baramee, Sirilak, Ungkulpasvich, Umbhorn, Tachaapaikoon, Chakrit, Pason, Patthra, Waeonukul, Rattiya, Ratanakhanokchai, Khanok, Kosugi, Akihiko
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7859314/
https://www.ncbi.nlm.nih.gov/pubmed/33553530
http://dx.doi.org/10.1016/j.dib.2021.106784
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author Chhe, Chinda
Uke, Ayaka
Baramee, Sirilak
Ungkulpasvich, Umbhorn
Tachaapaikoon, Chakrit
Pason, Patthra
Waeonukul, Rattiya
Ratanakhanokchai, Khanok
Kosugi, Akihiko
author_facet Chhe, Chinda
Uke, Ayaka
Baramee, Sirilak
Ungkulpasvich, Umbhorn
Tachaapaikoon, Chakrit
Pason, Patthra
Waeonukul, Rattiya
Ratanakhanokchai, Khanok
Kosugi, Akihiko
author_sort Chhe, Chinda
collection PubMed
description Thermophilic, facultatively anaerobic, xylanolytic bacterial strain DA-C8 (=JCM34211 =DSM111723), newly isolated from compost, shows strong beechwood xylan degradation ability. Whole-genome sequencing of strain DA-C8 on the Ion GeneStudio S5 system yielded 69 contigs with a total size of 3,110,565 bp, 2,877 protein-coding sequences, and a G+C content of 52.3 mol%. Genome annotation revealed that strain DA-C8 possesses debranching enzymes, such as β-L-arabinofuranosidase and polygalacturonase, that are important for efficient degradation of xylan. As inferred from 16S rRNA sequences and average nucleotide identity values, the closest relatives of strain DA-C8 are Paenibacillus cisolokensis and P. chitinolyticus. The genomic data have been deposited at the National Center for Biotechnology Information (NCBI) under accession number BMAQ00000000.
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spelling pubmed-78593142021-02-05 Draft genome sequence data of the facultative, thermophilic, xylanolytic bacterium Paenibacillus sp. strain DA-C8 Chhe, Chinda Uke, Ayaka Baramee, Sirilak Ungkulpasvich, Umbhorn Tachaapaikoon, Chakrit Pason, Patthra Waeonukul, Rattiya Ratanakhanokchai, Khanok Kosugi, Akihiko Data Brief Data Article Thermophilic, facultatively anaerobic, xylanolytic bacterial strain DA-C8 (=JCM34211 =DSM111723), newly isolated from compost, shows strong beechwood xylan degradation ability. Whole-genome sequencing of strain DA-C8 on the Ion GeneStudio S5 system yielded 69 contigs with a total size of 3,110,565 bp, 2,877 protein-coding sequences, and a G+C content of 52.3 mol%. Genome annotation revealed that strain DA-C8 possesses debranching enzymes, such as β-L-arabinofuranosidase and polygalacturonase, that are important for efficient degradation of xylan. As inferred from 16S rRNA sequences and average nucleotide identity values, the closest relatives of strain DA-C8 are Paenibacillus cisolokensis and P. chitinolyticus. The genomic data have been deposited at the National Center for Biotechnology Information (NCBI) under accession number BMAQ00000000. Elsevier 2021-01-22 /pmc/articles/PMC7859314/ /pubmed/33553530 http://dx.doi.org/10.1016/j.dib.2021.106784 Text en © 2021 The Author(s) http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Chhe, Chinda
Uke, Ayaka
Baramee, Sirilak
Ungkulpasvich, Umbhorn
Tachaapaikoon, Chakrit
Pason, Patthra
Waeonukul, Rattiya
Ratanakhanokchai, Khanok
Kosugi, Akihiko
Draft genome sequence data of the facultative, thermophilic, xylanolytic bacterium Paenibacillus sp. strain DA-C8
title Draft genome sequence data of the facultative, thermophilic, xylanolytic bacterium Paenibacillus sp. strain DA-C8
title_full Draft genome sequence data of the facultative, thermophilic, xylanolytic bacterium Paenibacillus sp. strain DA-C8
title_fullStr Draft genome sequence data of the facultative, thermophilic, xylanolytic bacterium Paenibacillus sp. strain DA-C8
title_full_unstemmed Draft genome sequence data of the facultative, thermophilic, xylanolytic bacterium Paenibacillus sp. strain DA-C8
title_short Draft genome sequence data of the facultative, thermophilic, xylanolytic bacterium Paenibacillus sp. strain DA-C8
title_sort draft genome sequence data of the facultative, thermophilic, xylanolytic bacterium paenibacillus sp. strain da-c8
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7859314/
https://www.ncbi.nlm.nih.gov/pubmed/33553530
http://dx.doi.org/10.1016/j.dib.2021.106784
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