Cargando…

Edge-Aware Pyramidal Deformable Network for Unsupervised Registration of Brain MR Images

Deformable image registration is of essential important for clinical diagnosis, treatment planning, and surgical navigation. However, most existing registration solutions require separate rigid alignment before deformable registration, and may not well handle the large deformation circumstances. We...

Descripción completa

Detalles Bibliográficos
Autores principales: Cao, Yiqin, Zhu, Zhenyu, Rao, Yi, Qin, Chenchen, Lin, Di, Dou, Qi, Ni, Dong, Wang, Yi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7859447/
https://www.ncbi.nlm.nih.gov/pubmed/33551730
http://dx.doi.org/10.3389/fnins.2020.620235
_version_ 1783646735542779904
author Cao, Yiqin
Zhu, Zhenyu
Rao, Yi
Qin, Chenchen
Lin, Di
Dou, Qi
Ni, Dong
Wang, Yi
author_facet Cao, Yiqin
Zhu, Zhenyu
Rao, Yi
Qin, Chenchen
Lin, Di
Dou, Qi
Ni, Dong
Wang, Yi
author_sort Cao, Yiqin
collection PubMed
description Deformable image registration is of essential important for clinical diagnosis, treatment planning, and surgical navigation. However, most existing registration solutions require separate rigid alignment before deformable registration, and may not well handle the large deformation circumstances. We propose a novel edge-aware pyramidal deformable network (referred as EPReg) for unsupervised volumetric registration. Specifically, we propose to fully exploit the useful complementary information from the multi-level feature pyramids to predict multi-scale displacement fields. Such coarse-to-fine estimation facilitates the progressive refinement of the predicted registration field, which enables our network to handle large deformations between volumetric data. In addition, we integrate edge information with the original images as dual-inputs, which enhances the texture structures of image content, to impel the proposed network pay extra attention to the edge-aware information for structure alignment. The efficacy of our EPReg was extensively evaluated on three public brain MRI datasets including Mindboggle101, LPBA40, and IXI30. Experiments demonstrate our EPReg consistently outperformed several cutting-edge methods with respect to the metrics of Dice index (DSC), Hausdorff distance (HD), and average symmetric surface distance (ASSD). The proposed EPReg is a general solution for the problem of deformable volumetric registration.
format Online
Article
Text
id pubmed-7859447
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-78594472021-02-05 Edge-Aware Pyramidal Deformable Network for Unsupervised Registration of Brain MR Images Cao, Yiqin Zhu, Zhenyu Rao, Yi Qin, Chenchen Lin, Di Dou, Qi Ni, Dong Wang, Yi Front Neurosci Neuroscience Deformable image registration is of essential important for clinical diagnosis, treatment planning, and surgical navigation. However, most existing registration solutions require separate rigid alignment before deformable registration, and may not well handle the large deformation circumstances. We propose a novel edge-aware pyramidal deformable network (referred as EPReg) for unsupervised volumetric registration. Specifically, we propose to fully exploit the useful complementary information from the multi-level feature pyramids to predict multi-scale displacement fields. Such coarse-to-fine estimation facilitates the progressive refinement of the predicted registration field, which enables our network to handle large deformations between volumetric data. In addition, we integrate edge information with the original images as dual-inputs, which enhances the texture structures of image content, to impel the proposed network pay extra attention to the edge-aware information for structure alignment. The efficacy of our EPReg was extensively evaluated on three public brain MRI datasets including Mindboggle101, LPBA40, and IXI30. Experiments demonstrate our EPReg consistently outperformed several cutting-edge methods with respect to the metrics of Dice index (DSC), Hausdorff distance (HD), and average symmetric surface distance (ASSD). The proposed EPReg is a general solution for the problem of deformable volumetric registration. Frontiers Media S.A. 2021-01-21 /pmc/articles/PMC7859447/ /pubmed/33551730 http://dx.doi.org/10.3389/fnins.2020.620235 Text en Copyright © 2021 Cao, Zhu, Rao, Qin, Lin, Dou, Ni and Wang. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Cao, Yiqin
Zhu, Zhenyu
Rao, Yi
Qin, Chenchen
Lin, Di
Dou, Qi
Ni, Dong
Wang, Yi
Edge-Aware Pyramidal Deformable Network for Unsupervised Registration of Brain MR Images
title Edge-Aware Pyramidal Deformable Network for Unsupervised Registration of Brain MR Images
title_full Edge-Aware Pyramidal Deformable Network for Unsupervised Registration of Brain MR Images
title_fullStr Edge-Aware Pyramidal Deformable Network for Unsupervised Registration of Brain MR Images
title_full_unstemmed Edge-Aware Pyramidal Deformable Network for Unsupervised Registration of Brain MR Images
title_short Edge-Aware Pyramidal Deformable Network for Unsupervised Registration of Brain MR Images
title_sort edge-aware pyramidal deformable network for unsupervised registration of brain mr images
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7859447/
https://www.ncbi.nlm.nih.gov/pubmed/33551730
http://dx.doi.org/10.3389/fnins.2020.620235
work_keys_str_mv AT caoyiqin edgeawarepyramidaldeformablenetworkforunsupervisedregistrationofbrainmrimages
AT zhuzhenyu edgeawarepyramidaldeformablenetworkforunsupervisedregistrationofbrainmrimages
AT raoyi edgeawarepyramidaldeformablenetworkforunsupervisedregistrationofbrainmrimages
AT qinchenchen edgeawarepyramidaldeformablenetworkforunsupervisedregistrationofbrainmrimages
AT lindi edgeawarepyramidaldeformablenetworkforunsupervisedregistrationofbrainmrimages
AT douqi edgeawarepyramidaldeformablenetworkforunsupervisedregistrationofbrainmrimages
AT nidong edgeawarepyramidaldeformablenetworkforunsupervisedregistrationofbrainmrimages
AT wangyi edgeawarepyramidaldeformablenetworkforunsupervisedregistrationofbrainmrimages