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Edge-Aware Pyramidal Deformable Network for Unsupervised Registration of Brain MR Images
Deformable image registration is of essential important for clinical diagnosis, treatment planning, and surgical navigation. However, most existing registration solutions require separate rigid alignment before deformable registration, and may not well handle the large deformation circumstances. We...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7859447/ https://www.ncbi.nlm.nih.gov/pubmed/33551730 http://dx.doi.org/10.3389/fnins.2020.620235 |
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author | Cao, Yiqin Zhu, Zhenyu Rao, Yi Qin, Chenchen Lin, Di Dou, Qi Ni, Dong Wang, Yi |
author_facet | Cao, Yiqin Zhu, Zhenyu Rao, Yi Qin, Chenchen Lin, Di Dou, Qi Ni, Dong Wang, Yi |
author_sort | Cao, Yiqin |
collection | PubMed |
description | Deformable image registration is of essential important for clinical diagnosis, treatment planning, and surgical navigation. However, most existing registration solutions require separate rigid alignment before deformable registration, and may not well handle the large deformation circumstances. We propose a novel edge-aware pyramidal deformable network (referred as EPReg) for unsupervised volumetric registration. Specifically, we propose to fully exploit the useful complementary information from the multi-level feature pyramids to predict multi-scale displacement fields. Such coarse-to-fine estimation facilitates the progressive refinement of the predicted registration field, which enables our network to handle large deformations between volumetric data. In addition, we integrate edge information with the original images as dual-inputs, which enhances the texture structures of image content, to impel the proposed network pay extra attention to the edge-aware information for structure alignment. The efficacy of our EPReg was extensively evaluated on three public brain MRI datasets including Mindboggle101, LPBA40, and IXI30. Experiments demonstrate our EPReg consistently outperformed several cutting-edge methods with respect to the metrics of Dice index (DSC), Hausdorff distance (HD), and average symmetric surface distance (ASSD). The proposed EPReg is a general solution for the problem of deformable volumetric registration. |
format | Online Article Text |
id | pubmed-7859447 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-78594472021-02-05 Edge-Aware Pyramidal Deformable Network for Unsupervised Registration of Brain MR Images Cao, Yiqin Zhu, Zhenyu Rao, Yi Qin, Chenchen Lin, Di Dou, Qi Ni, Dong Wang, Yi Front Neurosci Neuroscience Deformable image registration is of essential important for clinical diagnosis, treatment planning, and surgical navigation. However, most existing registration solutions require separate rigid alignment before deformable registration, and may not well handle the large deformation circumstances. We propose a novel edge-aware pyramidal deformable network (referred as EPReg) for unsupervised volumetric registration. Specifically, we propose to fully exploit the useful complementary information from the multi-level feature pyramids to predict multi-scale displacement fields. Such coarse-to-fine estimation facilitates the progressive refinement of the predicted registration field, which enables our network to handle large deformations between volumetric data. In addition, we integrate edge information with the original images as dual-inputs, which enhances the texture structures of image content, to impel the proposed network pay extra attention to the edge-aware information for structure alignment. The efficacy of our EPReg was extensively evaluated on three public brain MRI datasets including Mindboggle101, LPBA40, and IXI30. Experiments demonstrate our EPReg consistently outperformed several cutting-edge methods with respect to the metrics of Dice index (DSC), Hausdorff distance (HD), and average symmetric surface distance (ASSD). The proposed EPReg is a general solution for the problem of deformable volumetric registration. Frontiers Media S.A. 2021-01-21 /pmc/articles/PMC7859447/ /pubmed/33551730 http://dx.doi.org/10.3389/fnins.2020.620235 Text en Copyright © 2021 Cao, Zhu, Rao, Qin, Lin, Dou, Ni and Wang. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Cao, Yiqin Zhu, Zhenyu Rao, Yi Qin, Chenchen Lin, Di Dou, Qi Ni, Dong Wang, Yi Edge-Aware Pyramidal Deformable Network for Unsupervised Registration of Brain MR Images |
title | Edge-Aware Pyramidal Deformable Network for Unsupervised Registration of Brain MR Images |
title_full | Edge-Aware Pyramidal Deformable Network for Unsupervised Registration of Brain MR Images |
title_fullStr | Edge-Aware Pyramidal Deformable Network for Unsupervised Registration of Brain MR Images |
title_full_unstemmed | Edge-Aware Pyramidal Deformable Network for Unsupervised Registration of Brain MR Images |
title_short | Edge-Aware Pyramidal Deformable Network for Unsupervised Registration of Brain MR Images |
title_sort | edge-aware pyramidal deformable network for unsupervised registration of brain mr images |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7859447/ https://www.ncbi.nlm.nih.gov/pubmed/33551730 http://dx.doi.org/10.3389/fnins.2020.620235 |
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