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Research on Components Assembly Platform of Biological Sequences Alignment Algorithm
After years of development, the complexity of the biological sequence alignment algorithm is gradually increasing, and the lack of high abstract level domain research leads to the complexity of its algorithm development and improvement. By applying the idea of software components to the design and d...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7859483/ https://www.ncbi.nlm.nih.gov/pubmed/33552143 http://dx.doi.org/10.3389/fgene.2020.630923 |
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author | Shi, Haihe Wu, Gang Zhang, Xuchu Wang, Jun Shi, Haipeng Xu, Shenghua |
author_facet | Shi, Haihe Wu, Gang Zhang, Xuchu Wang, Jun Shi, Haipeng Xu, Shenghua |
author_sort | Shi, Haihe |
collection | PubMed |
description | After years of development, the complexity of the biological sequence alignment algorithm is gradually increasing, and the lack of high abstract level domain research leads to the complexity of its algorithm development and improvement. By applying the idea of software components to the design and development of algorithms, the development efficiency and reliability of biological sequence alignment algorithms can be effectively improved. The component assembly platform applies related assembly technology, which simplifies the operation difficulty of component assembly and facilitates the maintenance and optimization of the algorithm. At the same time, a friendly visual interface is used to intuitively complete the assembly of algorithm components, and an executable sequence alignment algorithm program is obtained, which can directly carry out alignment computing. |
format | Online Article Text |
id | pubmed-7859483 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-78594832021-02-05 Research on Components Assembly Platform of Biological Sequences Alignment Algorithm Shi, Haihe Wu, Gang Zhang, Xuchu Wang, Jun Shi, Haipeng Xu, Shenghua Front Genet Genetics After years of development, the complexity of the biological sequence alignment algorithm is gradually increasing, and the lack of high abstract level domain research leads to the complexity of its algorithm development and improvement. By applying the idea of software components to the design and development of algorithms, the development efficiency and reliability of biological sequence alignment algorithms can be effectively improved. The component assembly platform applies related assembly technology, which simplifies the operation difficulty of component assembly and facilitates the maintenance and optimization of the algorithm. At the same time, a friendly visual interface is used to intuitively complete the assembly of algorithm components, and an executable sequence alignment algorithm program is obtained, which can directly carry out alignment computing. Frontiers Media S.A. 2021-01-21 /pmc/articles/PMC7859483/ /pubmed/33552143 http://dx.doi.org/10.3389/fgene.2020.630923 Text en Copyright © 2021 Shi, Wu, Zhang, Wang, Shi and Xu. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Shi, Haihe Wu, Gang Zhang, Xuchu Wang, Jun Shi, Haipeng Xu, Shenghua Research on Components Assembly Platform of Biological Sequences Alignment Algorithm |
title | Research on Components Assembly Platform of Biological Sequences Alignment Algorithm |
title_full | Research on Components Assembly Platform of Biological Sequences Alignment Algorithm |
title_fullStr | Research on Components Assembly Platform of Biological Sequences Alignment Algorithm |
title_full_unstemmed | Research on Components Assembly Platform of Biological Sequences Alignment Algorithm |
title_short | Research on Components Assembly Platform of Biological Sequences Alignment Algorithm |
title_sort | research on components assembly platform of biological sequences alignment algorithm |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7859483/ https://www.ncbi.nlm.nih.gov/pubmed/33552143 http://dx.doi.org/10.3389/fgene.2020.630923 |
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