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Fusion of Deep Convolution and Shallow Features to Recognize the Severity of Wheat Fusarium Head Blight

A fast and nondestructive method for recognizing the severity of wheat Fusarium head blight (FHB) can effectively reduce fungicide use and associated costs in wheat production. This study proposed a feature fusion method based on deep convolution and shallow features derived from the high-resolution...

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Autores principales: Gu, Chunyan, Wang, Daoyong, Zhang, Huihui, Zhang, Jian, Zhang, Dongyan, Liang, Dong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7859649/
https://www.ncbi.nlm.nih.gov/pubmed/33552097
http://dx.doi.org/10.3389/fpls.2020.599886
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author Gu, Chunyan
Wang, Daoyong
Zhang, Huihui
Zhang, Jian
Zhang, Dongyan
Liang, Dong
author_facet Gu, Chunyan
Wang, Daoyong
Zhang, Huihui
Zhang, Jian
Zhang, Dongyan
Liang, Dong
author_sort Gu, Chunyan
collection PubMed
description A fast and nondestructive method for recognizing the severity of wheat Fusarium head blight (FHB) can effectively reduce fungicide use and associated costs in wheat production. This study proposed a feature fusion method based on deep convolution and shallow features derived from the high-resolution digital Red-green-blue (RGB) images of wheat FHB at different disease severity levels. To test the robustness of the proposed method, the RGB images were taken under different influence factors including light condition, camera shooting angle, image resolution, and crop growth period. All images were preprocessed to eliminate background noises to improve recognition accuracy. The AlexNet model parameters trained by the ImageNet 2012 dataset were transferred to the test dataset to extract the deep convolution feature of wheat FHB. Next, the color and texture features of wheat ears were extracted as shallow features. Then, the Relief-F algorithm was used to fuse the deep convolution feature and shallow features as the final FHB features. Finally, the random forest was used to classify and identify the features of different FHB severity levels. Results show that the recognition accuracy of the proposed fusion feature model was higher than those of models using other features in all conditions. The highest recognition accuracy of severity levels was obtained when images were taken under indoor conditions, with high resolution (12 MB pixels), at 90° shooting angle during the crop filling period. The Relief-F algorithm assigned different weights to the features under different influence factors; it made the fused feature model more robust and improved the ability to recognize wheat FHB severity levels using RGB images.
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spelling pubmed-78596492021-02-05 Fusion of Deep Convolution and Shallow Features to Recognize the Severity of Wheat Fusarium Head Blight Gu, Chunyan Wang, Daoyong Zhang, Huihui Zhang, Jian Zhang, Dongyan Liang, Dong Front Plant Sci Plant Science A fast and nondestructive method for recognizing the severity of wheat Fusarium head blight (FHB) can effectively reduce fungicide use and associated costs in wheat production. This study proposed a feature fusion method based on deep convolution and shallow features derived from the high-resolution digital Red-green-blue (RGB) images of wheat FHB at different disease severity levels. To test the robustness of the proposed method, the RGB images were taken under different influence factors including light condition, camera shooting angle, image resolution, and crop growth period. All images were preprocessed to eliminate background noises to improve recognition accuracy. The AlexNet model parameters trained by the ImageNet 2012 dataset were transferred to the test dataset to extract the deep convolution feature of wheat FHB. Next, the color and texture features of wheat ears were extracted as shallow features. Then, the Relief-F algorithm was used to fuse the deep convolution feature and shallow features as the final FHB features. Finally, the random forest was used to classify and identify the features of different FHB severity levels. Results show that the recognition accuracy of the proposed fusion feature model was higher than those of models using other features in all conditions. The highest recognition accuracy of severity levels was obtained when images were taken under indoor conditions, with high resolution (12 MB pixels), at 90° shooting angle during the crop filling period. The Relief-F algorithm assigned different weights to the features under different influence factors; it made the fused feature model more robust and improved the ability to recognize wheat FHB severity levels using RGB images. Frontiers Media S.A. 2021-01-21 /pmc/articles/PMC7859649/ /pubmed/33552097 http://dx.doi.org/10.3389/fpls.2020.599886 Text en Copyright © 2021 Gu, Wang, Zhang, Zhang, Zhang and Liang. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Gu, Chunyan
Wang, Daoyong
Zhang, Huihui
Zhang, Jian
Zhang, Dongyan
Liang, Dong
Fusion of Deep Convolution and Shallow Features to Recognize the Severity of Wheat Fusarium Head Blight
title Fusion of Deep Convolution and Shallow Features to Recognize the Severity of Wheat Fusarium Head Blight
title_full Fusion of Deep Convolution and Shallow Features to Recognize the Severity of Wheat Fusarium Head Blight
title_fullStr Fusion of Deep Convolution and Shallow Features to Recognize the Severity of Wheat Fusarium Head Blight
title_full_unstemmed Fusion of Deep Convolution and Shallow Features to Recognize the Severity of Wheat Fusarium Head Blight
title_short Fusion of Deep Convolution and Shallow Features to Recognize the Severity of Wheat Fusarium Head Blight
title_sort fusion of deep convolution and shallow features to recognize the severity of wheat fusarium head blight
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7859649/
https://www.ncbi.nlm.nih.gov/pubmed/33552097
http://dx.doi.org/10.3389/fpls.2020.599886
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