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Tuberculosis Diagnostics and Localization in Chest X-Rays via Deep Learning Models

For decades, tuberculosis (TB), a potentially serious infectious lung disease, continues to be a leading cause of worldwide death. Proven to be conveniently efficient and cost-effective, chest X-ray (CXR) has become the preliminary medical imaging tool for detecting TB. Arguably, the quality of TB d...

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Autores principales: Guo, Ruihua, Passi, Kalpdrum, Jain, Chakresh Kumar
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7861240/
https://www.ncbi.nlm.nih.gov/pubmed/33733221
http://dx.doi.org/10.3389/frai.2020.583427
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author Guo, Ruihua
Passi, Kalpdrum
Jain, Chakresh Kumar
author_facet Guo, Ruihua
Passi, Kalpdrum
Jain, Chakresh Kumar
author_sort Guo, Ruihua
collection PubMed
description For decades, tuberculosis (TB), a potentially serious infectious lung disease, continues to be a leading cause of worldwide death. Proven to be conveniently efficient and cost-effective, chest X-ray (CXR) has become the preliminary medical imaging tool for detecting TB. Arguably, the quality of TB diagnosis will improve vastly with automated CXRs for TB detection and the localization of suspected areas, which may manifest TB. The current line of research aims to develop an efficient computer-aided detection system that will support doctors (and radiologists) to become well-informed when making TB diagnosis from patients' CXRs. Here, an integrated process to improve TB diagnostics via convolutional neural networks (CNNs) and localization in CXRs via deep-learning models is proposed. Three key steps in the TB diagnostics process include (a) modifying CNN model structures, (b) model fine-tuning via artificial bee colony algorithm, and (c) the implementation of linear average–based ensemble method. Comparisons of the overall performance are made across all three steps among the experimented deep CNN models on two publicly available CXR datasets, namely, the Shenzhen Hospital CXR dataset and the National Institutes of Health CXR dataset. Validated performance includes detecting CXR abnormalities and differentiating among seven TB-related manifestations (consolidation, effusion, fibrosis, infiltration, mass, nodule, and pleural thickening). Importantly, class activation mapping is employed to inform a visual interpretation of the diagnostic result by localizing the detected lung abnormality manifestation on CXR. Compared to the state-of-the-art, the resulting approach showcases an outstanding performance both in the lung abnormality detection and the specific TB-related manifestation diagnosis vis-à-vis the localization in CXRs.
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spelling pubmed-78612402021-03-16 Tuberculosis Diagnostics and Localization in Chest X-Rays via Deep Learning Models Guo, Ruihua Passi, Kalpdrum Jain, Chakresh Kumar Front Artif Intell Artificial Intelligence For decades, tuberculosis (TB), a potentially serious infectious lung disease, continues to be a leading cause of worldwide death. Proven to be conveniently efficient and cost-effective, chest X-ray (CXR) has become the preliminary medical imaging tool for detecting TB. Arguably, the quality of TB diagnosis will improve vastly with automated CXRs for TB detection and the localization of suspected areas, which may manifest TB. The current line of research aims to develop an efficient computer-aided detection system that will support doctors (and radiologists) to become well-informed when making TB diagnosis from patients' CXRs. Here, an integrated process to improve TB diagnostics via convolutional neural networks (CNNs) and localization in CXRs via deep-learning models is proposed. Three key steps in the TB diagnostics process include (a) modifying CNN model structures, (b) model fine-tuning via artificial bee colony algorithm, and (c) the implementation of linear average–based ensemble method. Comparisons of the overall performance are made across all three steps among the experimented deep CNN models on two publicly available CXR datasets, namely, the Shenzhen Hospital CXR dataset and the National Institutes of Health CXR dataset. Validated performance includes detecting CXR abnormalities and differentiating among seven TB-related manifestations (consolidation, effusion, fibrosis, infiltration, mass, nodule, and pleural thickening). Importantly, class activation mapping is employed to inform a visual interpretation of the diagnostic result by localizing the detected lung abnormality manifestation on CXR. Compared to the state-of-the-art, the resulting approach showcases an outstanding performance both in the lung abnormality detection and the specific TB-related manifestation diagnosis vis-à-vis the localization in CXRs. Frontiers Media S.A. 2020-10-05 /pmc/articles/PMC7861240/ /pubmed/33733221 http://dx.doi.org/10.3389/frai.2020.583427 Text en Copyright © 2020 Guo, Passi and Jain. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Artificial Intelligence
Guo, Ruihua
Passi, Kalpdrum
Jain, Chakresh Kumar
Tuberculosis Diagnostics and Localization in Chest X-Rays via Deep Learning Models
title Tuberculosis Diagnostics and Localization in Chest X-Rays via Deep Learning Models
title_full Tuberculosis Diagnostics and Localization in Chest X-Rays via Deep Learning Models
title_fullStr Tuberculosis Diagnostics and Localization in Chest X-Rays via Deep Learning Models
title_full_unstemmed Tuberculosis Diagnostics and Localization in Chest X-Rays via Deep Learning Models
title_short Tuberculosis Diagnostics and Localization in Chest X-Rays via Deep Learning Models
title_sort tuberculosis diagnostics and localization in chest x-rays via deep learning models
topic Artificial Intelligence
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7861240/
https://www.ncbi.nlm.nih.gov/pubmed/33733221
http://dx.doi.org/10.3389/frai.2020.583427
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