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Gene regulation contributes to explain the impact of early life socioeconomic disadvantage on adult inflammatory levels in two cohort studies

Individuals experiencing socioeconomic disadvantage in childhood have a higher rate of inflammation-related diseases decades later. Little is known about the mechanisms linking early life experiences to the functioning of the immune system in adulthood. To address this, we explore the relationship a...

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Autores principales: Carmeli, Cristian, Kutalik, Zoltán, Mishra, Pashupati P., Porcu, Eleonora, Delpierre, Cyrille, Delaneau, Olivier, Kelly-Irving, Michelle, Bochud, Murielle, Dhayat, Nasser A., Ponte, Belen, Pruijm, Menno, Ehret, Georg, Kähönen, Mika, Lehtimäki, Terho, Raitakari, Olli T., Vineis, Paolo, Kivimäki, Mika, Chadeau-Hyam, Marc, Dermitzakis, Emmanouil, Vuilleumier, Nicolas, Stringhini, Silvia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7862626/
https://www.ncbi.nlm.nih.gov/pubmed/33542415
http://dx.doi.org/10.1038/s41598-021-82714-2
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author Carmeli, Cristian
Kutalik, Zoltán
Mishra, Pashupati P.
Porcu, Eleonora
Delpierre, Cyrille
Delaneau, Olivier
Kelly-Irving, Michelle
Bochud, Murielle
Dhayat, Nasser A.
Ponte, Belen
Pruijm, Menno
Ehret, Georg
Kähönen, Mika
Lehtimäki, Terho
Raitakari, Olli T.
Vineis, Paolo
Kivimäki, Mika
Chadeau-Hyam, Marc
Dermitzakis, Emmanouil
Vuilleumier, Nicolas
Stringhini, Silvia
author_facet Carmeli, Cristian
Kutalik, Zoltán
Mishra, Pashupati P.
Porcu, Eleonora
Delpierre, Cyrille
Delaneau, Olivier
Kelly-Irving, Michelle
Bochud, Murielle
Dhayat, Nasser A.
Ponte, Belen
Pruijm, Menno
Ehret, Georg
Kähönen, Mika
Lehtimäki, Terho
Raitakari, Olli T.
Vineis, Paolo
Kivimäki, Mika
Chadeau-Hyam, Marc
Dermitzakis, Emmanouil
Vuilleumier, Nicolas
Stringhini, Silvia
author_sort Carmeli, Cristian
collection PubMed
description Individuals experiencing socioeconomic disadvantage in childhood have a higher rate of inflammation-related diseases decades later. Little is known about the mechanisms linking early life experiences to the functioning of the immune system in adulthood. To address this, we explore the relationship across social-to-biological layers of early life social exposures on levels of adulthood inflammation and the mediating role of gene regulatory mechanisms, epigenetic and transcriptomic profiling from blood, in 2,329 individuals from two European cohort studies. Consistently across both studies, we find transcriptional activity explains a substantive proportion (78% and 26%) of the estimated effect of early life disadvantaged social exposures on levels of adulthood inflammation. Furthermore, we show that mechanisms other than cis DNA methylation may regulate those transcriptional fingerprints. These results further our understanding of social-to-biological transitions by pinpointing the role of gene regulation that cannot fully be explained by differential cis DNA methylation.
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spelling pubmed-78626262021-02-08 Gene regulation contributes to explain the impact of early life socioeconomic disadvantage on adult inflammatory levels in two cohort studies Carmeli, Cristian Kutalik, Zoltán Mishra, Pashupati P. Porcu, Eleonora Delpierre, Cyrille Delaneau, Olivier Kelly-Irving, Michelle Bochud, Murielle Dhayat, Nasser A. Ponte, Belen Pruijm, Menno Ehret, Georg Kähönen, Mika Lehtimäki, Terho Raitakari, Olli T. Vineis, Paolo Kivimäki, Mika Chadeau-Hyam, Marc Dermitzakis, Emmanouil Vuilleumier, Nicolas Stringhini, Silvia Sci Rep Article Individuals experiencing socioeconomic disadvantage in childhood have a higher rate of inflammation-related diseases decades later. Little is known about the mechanisms linking early life experiences to the functioning of the immune system in adulthood. To address this, we explore the relationship across social-to-biological layers of early life social exposures on levels of adulthood inflammation and the mediating role of gene regulatory mechanisms, epigenetic and transcriptomic profiling from blood, in 2,329 individuals from two European cohort studies. Consistently across both studies, we find transcriptional activity explains a substantive proportion (78% and 26%) of the estimated effect of early life disadvantaged social exposures on levels of adulthood inflammation. Furthermore, we show that mechanisms other than cis DNA methylation may regulate those transcriptional fingerprints. These results further our understanding of social-to-biological transitions by pinpointing the role of gene regulation that cannot fully be explained by differential cis DNA methylation. Nature Publishing Group UK 2021-02-04 /pmc/articles/PMC7862626/ /pubmed/33542415 http://dx.doi.org/10.1038/s41598-021-82714-2 Text en © The Author(s) 2021 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Carmeli, Cristian
Kutalik, Zoltán
Mishra, Pashupati P.
Porcu, Eleonora
Delpierre, Cyrille
Delaneau, Olivier
Kelly-Irving, Michelle
Bochud, Murielle
Dhayat, Nasser A.
Ponte, Belen
Pruijm, Menno
Ehret, Georg
Kähönen, Mika
Lehtimäki, Terho
Raitakari, Olli T.
Vineis, Paolo
Kivimäki, Mika
Chadeau-Hyam, Marc
Dermitzakis, Emmanouil
Vuilleumier, Nicolas
Stringhini, Silvia
Gene regulation contributes to explain the impact of early life socioeconomic disadvantage on adult inflammatory levels in two cohort studies
title Gene regulation contributes to explain the impact of early life socioeconomic disadvantage on adult inflammatory levels in two cohort studies
title_full Gene regulation contributes to explain the impact of early life socioeconomic disadvantage on adult inflammatory levels in two cohort studies
title_fullStr Gene regulation contributes to explain the impact of early life socioeconomic disadvantage on adult inflammatory levels in two cohort studies
title_full_unstemmed Gene regulation contributes to explain the impact of early life socioeconomic disadvantage on adult inflammatory levels in two cohort studies
title_short Gene regulation contributes to explain the impact of early life socioeconomic disadvantage on adult inflammatory levels in two cohort studies
title_sort gene regulation contributes to explain the impact of early life socioeconomic disadvantage on adult inflammatory levels in two cohort studies
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7862626/
https://www.ncbi.nlm.nih.gov/pubmed/33542415
http://dx.doi.org/10.1038/s41598-021-82714-2
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